Gene Plim_2902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2902 
Symbol 
ID9139614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp3759069 
End bp3759638 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content55% 
IMG OID 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_003630923 
Protein GI296123145 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTTG TTGAACTTGC ACAGCGAATT AAGAATCACC GGATTGATCA GCGGCTGACG 
CTGGATCAGG TGGCGTCGCG TACCGGACTG ACGCGCAGCT GGTGGTCGAA GGTTGAGAAC 
TTTCGCATTA CACCGTCTCT GCAGTCGCTG GGCCAGATTG CGGCTGCTCT GGGAGTGAGT 
GTCTCCGATC TGGTCGAAGG GCTGGATCGC AAGCCACAGA TGGCGGTCAT CCGGAAATCT 
GAGCGTAAAG TCGTGGAGCG AAATCCCGAG ACGTCAGATA TTGTTTATGA ATCGTTGGCA 
CATGTTCGCC CTGATCGAGC CATGGATCCT TTTCTGCTGA CCGTGCCCGC CGGAGGTCAG 
AGAAAAGATG CCTTGGGCCA TGAAGGCGAA GAGTTTCTGC TGGTGCTCTC CGGTAAAGTG 
CAGCTCGAAT ACAACAATGA GATGCTGGAG CTGGAAGAAG GGGACAGCCT TTACTTCGAT 
GCCACCACTC CCCATCGGCT GGTCAATCCC TTTACGACCG ATACCCGGGT GCTGTGCGTT 
TTTTACAGCG GGCGCCAGGC CTCCGAGTGA
 
Protein sequence
MNLVELAQRI KNHRIDQRLT LDQVASRTGL TRSWWSKVEN FRITPSLQSL GQIAAALGVS 
VSDLVEGLDR KPQMAVIRKS ERKVVERNPE TSDIVYESLA HVRPDRAMDP FLLTVPAGGQ 
RKDALGHEGE EFLLVLSGKV QLEYNNEMLE LEEGDSLYFD ATTPHRLVNP FTTDTRVLCV 
FYSGRQASE