Gene Plim_2873 details

Gene Information

• Locus tag: Plim_2873
• ID: 9139585
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 3721454
• End bp: 3723406
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 55%
• Product: diguanylate cyclase
• Protein accession: YP_003630894
• Protein GI: 296123116

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTCCCG TTGAACGTAT CTGGAATTCT GCTCAACTCC CCACTCTCCC GGCTGTCGCT 
GTCCGATTGC TCGAAATCGT GCGTGATCCA GAGTCAGAAA TTCGAGATGT CGTCGAAACC 
ATCAAACTCG ATCCCGCCAT CAGTGCCAAA CTGGTTAAAG CCGCCAATGC CAGCTATTTC 
GGTGTGCGTA GCGAAGTCAA AGCCATGGAT CGCGCTGTTT CCATCCTGGG AACAACCGTC 
GCCACCTCTT TAGCACTCAG CTTCTCTCTC ACAGATGAAT CTCTCCAGAC TGGCCCCAAA 
GCCGAACATT ATCGCAACTT CTGGGTTCAC TCCGTCGTTC AGGCTGCCAC TGCCGAACTG 
ATTGGCCAGA AACTTGAACC CGCACAACGC GGAGAATACT TCCTCACCGG CCTGCTGCTC 
GAACTGGGCC GGCTCGCCAT GCTCAAAACT ATTCCCAACG AGTACATTCC TGTTCTGGAA 
GAAGCCAAAC TTCCCGGAAC GACTCTATCG CAACTCGAAG AAGCTCGTCT GGGGTTCACA 
CACGTCCAGA TCGCTCAGCA GATGATGACA CTCTGGAAGC TGCCCGAAGG CATTATCCAT 
GCAGCTGCCT TTCATCATGC TCCCCTCGAA AAAGTCCTCG AACTGGGCAC CGATCCCAAC 
GCCCGGCTGC TGAACGCCAT GGCGTTCAGT GCCGCCGCCG CCGATTATTT CTGCACGGCC 
AATAAAGGTC TCGCACTCCA CAGCCTCCGC GAAATCTCCA GCCATTGCCT GGAGATGACA 
GAAGACGACC TGGTTGTCTT CCTCAGTAAC ATTGAAGAAC GCTGCCGACA GGCCGCCGAA 
CTCTTCAACG TCAGTCTCTC TCATCTGCAA AACTCTGCCG ACCTGATGAT TCAGGCCAAC 
GAACAACTCG TACAACTCGC TTTGCGTGAA CATGTCGCCA GCACCCAGGC CTCCATCCGG 
CAGCATGTCG CCGAGCAGGA GAAGCGCGAA CTCGAAACGC GTAATCGCGA ATTGCAGCAG 
CAGGCGCTGC ATGATCCGCT CACCGGCGTC CATAACCGCA AATTCTTCGA TGAAGTTCTC 
CTTCGAGAAG TTCATCGCTG TGTGCGGGCT GCCCAGCCGC TGGCTGTCAT CTTTATCGAT 
GTCGATCATT TCAAGAACGT GAACGATACT TTTGGTCACC AGTTTGGTGA TCAGGTTCTC 
AAGCGTGTGG CCCAGATCTT CTCCGAAACC GTTCGCGTCG CCGATACACT CGCTCGCTTT 
GGTGGCGAAG AATTTGTTGT CCTGGTCAGC CAGCCTTCCG AAAAAGGTGT CGAACGACTG 
GCCGAGCGTA TTCGCGAGAA CGTCGAAAAA GAGGCGTTCC GCTTCGGCTC CACACCTGTC 
AAAATCACAG TCAGTGTGGG TGCTGCCATT GCCATTCCTC GTCGAGGCGA AACCGGTATT 
GGTGACCGCC TGATTGCCGT TGCCGATGAA TGTCTCTACG AAGCCAAACG CAATGGACGC 
AATCGCACGA TTCTTCGTCA CGTCATGGAT GAACGCGACC GCCAGCTCCA GCAACTCATT 
ACTCAGACAC GTTTCAGCCG CTGGCTCGTC CAGCAGAGAT TGCTCGATGT CCCGTCGATC 
TCTCGTGTCC TGCTCGATTG CCAGACTCCA CATGTCCAGT GCGGCGAACT TGCCGTGCGG 
ATGGGCTATC TTGACATTGC CGAACTGCAC AGCATTCTCA AACATCAGGA AGTTACGGGC 
GATCGGTTCT GTGCCGTCGC TGTGAGACTC GGCTTGATGA CCGCGACAGA AACCGTCTTC 
GTACTGGCGA CGCAGCAGGA AGATCCACGA ACGGTCATGG GTGCTCTGGT TCGCACGGGC 
CTCTTATCAC CCGACGTCGC TTCTGGTGCT CTGGAAGACT ACACACGTAT GATCGCCCCA 
CCTGCTAAAC ACCGGGTGAT GGCCTTCGCG TGA 

 

Protein sequence

MIPVERIWNS AQLPTLPAVA VRLLEIVRDP ESEIRDVVET IKLDPAISAK LVKAANASYF 
GVRSEVKAMD RAVSILGTTV ATSLALSFSL TDESLQTGPK AEHYRNFWVH SVVQAATAEL 
IGQKLEPAQR GEYFLTGLLL ELGRLAMLKT IPNEYIPVLE EAKLPGTTLS QLEEARLGFT 
HVQIAQQMMT LWKLPEGIIH AAAFHHAPLE KVLELGTDPN ARLLNAMAFS AAAADYFCTA 
NKGLALHSLR EISSHCLEMT EDDLVVFLSN IEERCRQAAE LFNVSLSHLQ NSADLMIQAN 
EQLVQLALRE HVASTQASIR QHVAEQEKRE LETRNRELQQ QALHDPLTGV HNRKFFDEVL 
LREVHRCVRA AQPLAVIFID VDHFKNVNDT FGHQFGDQVL KRVAQIFSET VRVADTLARF 
GGEEFVVLVS QPSEKGVERL AERIRENVEK EAFRFGSTPV KITVSVGAAI AIPRRGETGI 
GDRLIAVADE CLYEAKRNGR NRTILRHVMD ERDRQLQQLI TQTRFSRWLV QQRLLDVPSI 
SRVLLDCQTP HVQCGELAVR MGYLDIAELH SILKHQEVTG DRFCAVAVRL GLMTATETVF 
VLATQQEDPR TVMGALVRTG LLSPDVASGA LEDYTRMIAP PAKHRVMAFA