Gene Plim_2863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2863 
Symbol 
ID9139575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3709675 
End bp3710940 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003630884 
Protein GI296123106 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGAC GAGACTTTCT CAAAAACGTG GCAGCACTTG GCACAGCCTG CGCCCTGTCT 
CGACCTGATC GAAATCTGAC GGCTGGCGCC TGGGCAGCAC CATCAAAGAA CTCTCGCCCC
AAAATCCTCT TGCGATCTTC CTGGCAGACG GTGAACATCG GCGACATTGC CCACACGCCT
GGCGTCCTGC ATCTCCTGGA ACAGCATTAT CCCGAAGCCG AAGTCGGCTT ATGGCCCAGC
AGTGTCAAAG ATGGTGTCCA CGAGCTCCTC ATGGCTCGCT TCCCCCAACT CAAGATCGTG
CAGTCACGCG ATGAAATCAC CGCCGCACTC ACCGATTACG ATTTTCTGCT GCATGGCTCC
GGGCCATCCA TCGTCGGTGC GAAAGAAATT GACCGGTGGG TCAACGAAAC TCAAAAGCCT
TATGGCATCT TTGGCGTCAC TTTAGGAACC TTCGACGAAG CTACGCTCAA ACGGGTGAAC
AATGCCAGGT TCACATATTT TCGCGATCCC GTTTCTCTCG ATCGAGCCCG TGCGAATGGT
GCCACTTGTC CCATCATGGA TTTCGGGCCC GATGGAGCCT TTGCTGTCGA TCTGGCCAAC
CAGCCAGCCG CCGACGCGTT TCTAACCGCC CGAGAGCTCA CTCCCGGCGA GTTCATCTGC
TGTATCCCCA GGCTTCGCTA TACCCCTTAC TGGCTCATCA AGAATCAGCC CTTCGATGAG
AAAAAACATG CCCGCAACGA AAGCATGGCC GAGCATGATC ACGCCCCGCT GCGTGACGCC
ATCACTCAGG TTGTGCGTCA AACCAAAGCC AAAGTTCTCC TCTGCCCCGA AGATCGCTCA
CAAATGAAGG TCGGCAAAGA ATTGATCTTC GACAAACTTC CCGAAGATGT CCGCCCACGT
GTCGTCTGGC GTGAGAACTA CTGGCTCACC GATGAAGCCC TGAGTGTCTA TCGGCAATCG
TTGGGCTTGT TCGGCCTCGA AATGCACTCG CCAATCATGT GTATTGGCAA CGGAATCCCT
GCCATTGTGG GCCGGTTTGA AGAACAAACC AGCAAAGGGA CCATGTGGAA TGCCATTGGT
CTCAAGGACT GGCTCTTCGA CTTCGATCAA CCCGCTCAAC TCGCCCAGCT TTCAGAGACC
GTCGTATCTC TCGTCAAAGA TCCGCTGGCT GCCAAAGAAA AAGCCGCTAC AGCCCAGAAA
CTGGTCGCCG CCAAACAACA GGCCATGGTT GAACAACTCA AAACGACCGT CGCTGCATCG
ACCTGA
 
Protein sequence
MQRRDFLKNV AALGTACALS RPDRNLTAGA WAAPSKNSRP KILLRSSWQT VNIGDIAHTP 
GVLHLLEQHY PEAEVGLWPS SVKDGVHELL MARFPQLKIV QSRDEITAAL TDYDFLLHGS
GPSIVGAKEI DRWVNETQKP YGIFGVTLGT FDEATLKRVN NARFTYFRDP VSLDRARANG
ATCPIMDFGP DGAFAVDLAN QPAADAFLTA RELTPGEFIC CIPRLRYTPY WLIKNQPFDE
KKHARNESMA EHDHAPLRDA ITQVVRQTKA KVLLCPEDRS QMKVGKELIF DKLPEDVRPR
VVWRENYWLT DEALSVYRQS LGLFGLEMHS PIMCIGNGIP AIVGRFEEQT SKGTMWNAIG
LKDWLFDFDQ PAQLAQLSET VVSLVKDPLA AKEKAATAQK LVAAKQQAMV EQLKTTVAAS
T