Gene Plim_2860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2860 
Symbol 
ID9139572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3706149 
End bp3707438 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content57% 
IMG OID 
Productanti-anti-sigma factor 
Protein accessionYP_003630881 
Protein GI296123103 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATAA CTCCACAACC ACATGGCGAT CTTCTGGAGC TGAAGTTGAG CGGGCGGCTC 
GATGCCGAGT GGGCCGACCT GTTGAAAAGT GCAATTCAGG ATGCGTTGCG TCGTGGTTCG
CATGCTCTGC TGCTCGATTT TACCGAAGTC CATTATGTGA GTTCGGCGGG ACTTTCCGTG
CTGGTGAATG CTCATCAGAA GTATCAGGAA ATTCGAGGTT TCTTCGGTAT TGGCGGTCTC
ACAGGCCCGG TCGAAGAAGT GGTACGACTC ACAGGGCTGT CGAAGCTTTT GTTGTGTGAT
CCCGAAACTG CGCGAAAGTC GCATGCGGGG GCTATGGCGA CAGTCCATCT TCCCGTGGGA
ATCAAGTCGA CCTCTGCGGC TGATTACGAA GTGTACGACC TCGAGACATT GGGGCCCGTC
GAATGGGAAT GTCTCGGGAA GCCTGATGAC TTTGATAGCC TGCCCATCGT GGCGAACCCG
GCGAATTCCT GGGAAATGTC GGCGCACGAT TTTGCGATTG GTCTGGGGGC TTTTTCGCAA
GATTCATCTG CAGCGGGCTC AGGGGCTGCA GGCTCGCAGA CCGGAGAACT CCTGGCGGCA
GCGGGTGTTG TCGCCATTCA GCCAGCCGGT GGGGCGACAC GGCCTGATTA CCAGATCCTG
CAGGGCGGGT ATTCGCCCAG GCCTCAATTG CTGTACGGAC TTCGATGCTC TGGCGAGCCA
CGGTGGCTCT TGCGATTTGA TCAGGATGAT CGAGAGGAGT TCCTGCCACT TTATCGGCTG
ACTGAAAGTG CCTTGGAGAC AGCCGGGAGT GAGGCGGCTT TGATATTGGT TCTGGCTGAA
ACCAGTGGCC TGGTGGGTGC CACATTACGG CAATCGCCAA CGGCACCTGT TGTGGGAAAT
TCTCGCTTTG AACATCCGGG GGTTCGCGAC TGGCTGGCAT GGACACCACA GCGCGAGCAT
GGGGAGTCGC TGGTGGTGGC CGTGGGTGTG GTGGCGAGCG TCAGCCGATT GGCCAATGAT
TCGCCACTGA AGCCATTCCT TAGACCATTA GCAAATGAGA GCGATCTGTG GGGGCATTTT
CATGCGGCCA TTTTCCCATT CAGGCCATTT AAGAAGCGAT TACTGGATTG GGGGCAATTT
ATTCCGGGAT TGTTTGAAAG TGGGACTTTG CAAGGGGTGA TGCATCTGGT GAATGATGAC
CGTCCGATTA TCGGGGCTGG CGACAGCGAG TTTATCCGCG GTGCCTGCTG GGTAGGTCCT
CTGGCTGCAG AGAGGGGGAT CTCGCGATGA
 
Protein sequence
MQITPQPHGD LLELKLSGRL DAEWADLLKS AIQDALRRGS HALLLDFTEV HYVSSAGLSV 
LVNAHQKYQE IRGFFGIGGL TGPVEEVVRL TGLSKLLLCD PETARKSHAG AMATVHLPVG
IKSTSAADYE VYDLETLGPV EWECLGKPDD FDSLPIVANP ANSWEMSAHD FAIGLGAFSQ
DSSAAGSGAA GSQTGELLAA AGVVAIQPAG GATRPDYQIL QGGYSPRPQL LYGLRCSGEP
RWLLRFDQDD REEFLPLYRL TESALETAGS EAALILVLAE TSGLVGATLR QSPTAPVVGN
SRFEHPGVRD WLAWTPQREH GESLVVAVGV VASVSRLAND SPLKPFLRPL ANESDLWGHF
HAAIFPFRPF KKRLLDWGQF IPGLFESGTL QGVMHLVNDD RPIIGAGDSE FIRGACWVGP
LAAERGISR