Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2860 |
Symbol | |
ID | 9139572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 3706149 |
End bp | 3707438 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | anti-anti-sigma factor |
Protein accession | YP_003630881 |
Protein GI | 296123103 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGATAA CTCCACAACC ACATGGCGAT CTTCTGGAGC TGAAGTTGAG CGGGCGGCTC GATGCCGAGT GGGCCGACCT GTTGAAAAGT GCAATTCAGG ATGCGTTGCG TCGTGGTTCG CATGCTCTGC TGCTCGATTT TACCGAAGTC CATTATGTGA GTTCGGCGGG ACTTTCCGTG CTGGTGAATG CTCATCAGAA GTATCAGGAA ATTCGAGGTT TCTTCGGTAT TGGCGGTCTC ACAGGCCCGG TCGAAGAAGT GGTACGACTC ACAGGGCTGT CGAAGCTTTT GTTGTGTGAT CCCGAAACTG CGCGAAAGTC GCATGCGGGG GCTATGGCGA CAGTCCATCT TCCCGTGGGA ATCAAGTCGA CCTCTGCGGC TGATTACGAA GTGTACGACC TCGAGACATT GGGGCCCGTC GAATGGGAAT GTCTCGGGAA GCCTGATGAC TTTGATAGCC TGCCCATCGT GGCGAACCCG GCGAATTCCT GGGAAATGTC GGCGCACGAT TTTGCGATTG GTCTGGGGGC TTTTTCGCAA GATTCATCTG CAGCGGGCTC AGGGGCTGCA GGCTCGCAGA CCGGAGAACT CCTGGCGGCA GCGGGTGTTG TCGCCATTCA GCCAGCCGGT GGGGCGACAC GGCCTGATTA CCAGATCCTG CAGGGCGGGT ATTCGCCCAG GCCTCAATTG CTGTACGGAC TTCGATGCTC TGGCGAGCCA CGGTGGCTCT TGCGATTTGA TCAGGATGAT CGAGAGGAGT TCCTGCCACT TTATCGGCTG ACTGAAAGTG CCTTGGAGAC AGCCGGGAGT GAGGCGGCTT TGATATTGGT TCTGGCTGAA ACCAGTGGCC TGGTGGGTGC CACATTACGG CAATCGCCAA CGGCACCTGT TGTGGGAAAT TCTCGCTTTG AACATCCGGG GGTTCGCGAC TGGCTGGCAT GGACACCACA GCGCGAGCAT GGGGAGTCGC TGGTGGTGGC CGTGGGTGTG GTGGCGAGCG TCAGCCGATT GGCCAATGAT TCGCCACTGA AGCCATTCCT TAGACCATTA GCAAATGAGA GCGATCTGTG GGGGCATTTT CATGCGGCCA TTTTCCCATT CAGGCCATTT AAGAAGCGAT TACTGGATTG GGGGCAATTT ATTCCGGGAT TGTTTGAAAG TGGGACTTTG CAAGGGGTGA TGCATCTGGT GAATGATGAC CGTCCGATTA TCGGGGCTGG CGACAGCGAG TTTATCCGCG GTGCCTGCTG GGTAGGTCCT CTGGCTGCAG AGAGGGGGAT CTCGCGATGA
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Protein sequence | MQITPQPHGD LLELKLSGRL DAEWADLLKS AIQDALRRGS HALLLDFTEV HYVSSAGLSV LVNAHQKYQE IRGFFGIGGL TGPVEEVVRL TGLSKLLLCD PETARKSHAG AMATVHLPVG IKSTSAADYE VYDLETLGPV EWECLGKPDD FDSLPIVANP ANSWEMSAHD FAIGLGAFSQ DSSAAGSGAA GSQTGELLAA AGVVAIQPAG GATRPDYQIL QGGYSPRPQL LYGLRCSGEP RWLLRFDQDD REEFLPLYRL TESALETAGS EAALILVLAE TSGLVGATLR QSPTAPVVGN SRFEHPGVRD WLAWTPQREH GESLVVAVGV VASVSRLAND SPLKPFLRPL ANESDLWGHF HAAIFPFRPF KKRLLDWGQF IPGLFESGTL QGVMHLVNDD RPIIGAGDSE FIRGACWVGP LAAERGISR
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