Gene Plim_2856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2856 
Symbol 
ID9139568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3701355 
End bp3702632 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content58% 
IMG OID 
ProductNeuraminidase (sialidase)-like protein 
Protein accessionYP_003630877 
Protein GI296123099 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.832165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCTC TTGTGGTCAA CTCATTGAAA ACCTCCCTCC TGGCTTTGTG CAGTTTCTGG 
GTGGGTACGA TCACTCTCAC TCCCTGCATC GCGTGGACAC TCGCTCTCAT CGCCTTCGCC
ACTCCCTTCG AATTCTGCAC TTCGCAGGAA AATCCCGCTC CTCTTGTCAA AGGCGACGAG
AACCTCTTCC GCACCGTCAT TCGCCGACAG GGAGACGACG GGATTCACAC CTATCGAATT
CCCGGCCTGG CCACATCGAA CAAGGGCACG CTCCTCGCGG TCTTCGATAA TCGCCACAAA
TCAGCCGTCG ATCTCCCGGG CGATATCGAC GTGGGACTCC TCCGCAGCAC CGATGGTGGC
CAGACCTGGG GGCCACTCCA AACCATCATG GATTACGACA AATCAGCCCC GAACTCCGCT
GGCAATGGTG TCGGCGATCC GGCCATTCTC GTCGATCGAG AGACCGGCGA AATCTTCGTG
ACCGCACTCT GGTCGTTCGG CAAACGAGCC TGGCATGGTT CCGGCCCCGG ACTTTCCCCC
GAAGAGACCG GCCAACTCGT CATAGCCTCC AGCAAAGACG ATGGACTCAC CTGGTCAACT
CCCGTCTCCA TCACGTCACA AGTCAAGCAG CCCGCCTGGC GGCTGTTATT CCAGGGGCCT
GGAGCCGGGA TTCAATTACA AAACGGGACA CTCGTTTTTG CGGCTCAATA CAAAGGAGCC
GACAACGTCG TCCATGCCTG TCTATTGTGG AGTAACGATC ACGGTCAGAG CTGGCACCTC
ACGCCCCCGG CAGCCGCCAG TCAGCCAGCC ACATCTGAAG CTCAGGTGGC AGAAGCCGCC
GATGGGACAC TCCTCTTCAC AATGCGGAAT GAAAGCCAGC GTGGTCAGAG ACTCTGGTCA
CGTTTCACCC CCGGTAAAAA CTCGCTGGGC GATGGCACAT GGTCAGCCCC TTACAGCCAG
TTGCCCGATC CGACCTGCAT GGCCAGCATC GTCAGGCATC CCTCCGGAGC ACTTCTGTTC
GCAAACCCTG CTTCTTCTCA AAAACGGGCC AATATGACCG TTCGAATTAG TGAAGATCTG
GGAAAATCGT GGTCCGAAGG CCGACTCATC GACTCCCGAC CGAGTGCGTA CTCCTGCCTC
ACAGTTCTCG CGAACGGCGA AATCGGCCTG CTCTACGAAT GCGGCGACCG CAACGCTTAC
GAAACATTAA CCTTCGCCCG CTTCCCCCTC GACTGGCTTA AAGGCGAAGA AAACTCCACG
AAACCCAGCC CAGAATGA
 
Protein sequence
MNSLVVNSLK TSLLALCSFW VGTITLTPCI AWTLALIAFA TPFEFCTSQE NPAPLVKGDE 
NLFRTVIRRQ GDDGIHTYRI PGLATSNKGT LLAVFDNRHK SAVDLPGDID VGLLRSTDGG
QTWGPLQTIM DYDKSAPNSA GNGVGDPAIL VDRETGEIFV TALWSFGKRA WHGSGPGLSP
EETGQLVIAS SKDDGLTWST PVSITSQVKQ PAWRLLFQGP GAGIQLQNGT LVFAAQYKGA
DNVVHACLLW SNDHGQSWHL TPPAAASQPA TSEAQVAEAA DGTLLFTMRN ESQRGQRLWS
RFTPGKNSLG DGTWSAPYSQ LPDPTCMASI VRHPSGALLF ANPASSQKRA NMTVRISEDL
GKSWSEGRLI DSRPSAYSCL TVLANGEIGL LYECGDRNAY ETLTFARFPL DWLKGEENST
KPSPE