| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2850 |
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| Symbol | |
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| ID | 9139562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 3692102 |
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| End bp | 3693685 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003630871 |
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| Protein GI | 296123093 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.28382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACCACT TAGTGAGACC GTCGAAAGCT AAGAGTCGAG CACGTACTCT TCTGCCGACA
TTGATCGCCG GCCTGGCGCT GAGTGCCCCG TCGTGCCGCA TTCCGGAACT GGAAGGCCCG
TTACAGGGCC CCTCCATGCC ATCCAGCTTC AGTTGGTTTA AGCGGAGTGT CCCTGATGTT
CCGGTCGTTC CGCCCAGCCC GGAAGAGGCA GGCACAGCCA CATTGAATGA AGCTTCCGAT
ATTGAGCAGG TCGGCTATAC TCGCCTCGAA ATGGCTGCTG ATACCTATGA AAACTCGGCA
CTCATCAGTT GGCGAGATTT CTTCGACGAT CCTAATCTCT TATGCCTCAT TGAAGAGGCG
ATGGTCGGGA ACCAGGAGCT GAGAATCCTG AATCAGGATA TTCAGATTGC TTATAACGAA
GTCAGCGCCA GGCGTGGTGC GATTCTGCCA TTCTTTACGT TAGGGGCAGG GGCGGGAGTT
GATAAACCAG GTCTCTTTAC TCGTGAAGGA GCCGTCGAAA GCCAACTGGA TGTCAAGCCC
GGCGTTGCCT TTCCAGAACC ACTACCTAAC TTTCTGGTCG CCGCGAATAT CTCGTGGGAA
ATCGACATCT GGCGAAAACT TCGCAATGCC CGCGATGCCG CTACACTTCG ATATTTAGGC
ACTTGCGATG GTCAGGCCTA TATGGTGACC AGACTGGTTT CCGAAGTAGC CGAAAAATAC
TACGAACTGA TGTCTCTCGA TAACCAGATG CAGATCCTTG ATAAAACGAT CGAGATTCAG
GAGCAAAGTC TGGAACTGGC CAAAGCGAGA AAAGCGGCTG GTCGCGATAC CGAATTGGCT
GTCCAGCGAT TCCAGGCGGA AGTTCGCAAA AATCAAAGTG AAAAACTGAT CATTCTGCAA
CAGATCGTGG AAGCCGAGAA CCGGATCAAT TTTCTTCTCG GTCGATATCC GCAGCCAGTC
ATGCGTTCCA CATCCAGCTT TCTGGATCTG AATCTGCAGC CTCTTTGTGC CGGCCTTCCC
GGTCAAATAA TGCAGAATCG ACCCGATGTG CGGCAGGCAG AAAAAGAGCT CTCGGCAGCC
GGGTTGGATG TAAAAGTCGC CCGCGCCAGA TTCTATCCTT CGCTCATTGT GAATGCTGGT
GTTGGCTATA ATGCATTTAA TGCCAAGTAT TTGTTCTCGA CGCCCGATTC GCTCATTTAC
AACGTCGCGG GTGATCTGGT AGCACCTGTT ATTAACAGAA GCGCCATTCA GGCTGACTAT
CTGACGGCGA ACGCCCAGCA GTTGCAGTGT GTCTACAACT ACCAGCAGGT CATCCTGAAT
GCTTATACCG AGATCGTGAA TCGACTATCC AAAGTCGAGA ACTATCAGGC CAGTATCGAA
ATCAAGAAGC AACAGCTGGC TGCTCTCGAA GCGTCGGTCG ATAGTGCGAC CAAACTCTTT
CAGAATGCCC GGGCCGAATA TGTCGAAGTC TTGCTGGCAC AGCGCGATAT GATGGAAGCC
CGCATGGTCT TGATTGAAAC CAAGCAGCAA CAACTGGCAG CAGCCATTAC TGCCTATCAG
GCTTTGGGCG GCGGCAGCTT CTAA
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| Protein sequence | MNHLVRPSKA KSRARTLLPT LIAGLALSAP SCRIPELEGP LQGPSMPSSF SWFKRSVPDV
PVVPPSPEEA GTATLNEASD IEQVGYTRLE MAADTYENSA LISWRDFFDD PNLLCLIEEA
MVGNQELRIL NQDIQIAYNE VSARRGAILP FFTLGAGAGV DKPGLFTREG AVESQLDVKP
GVAFPEPLPN FLVAANISWE IDIWRKLRNA RDAATLRYLG TCDGQAYMVT RLVSEVAEKY
YELMSLDNQM QILDKTIEIQ EQSLELAKAR KAAGRDTELA VQRFQAEVRK NQSEKLIILQ
QIVEAENRIN FLLGRYPQPV MRSTSSFLDL NLQPLCAGLP GQIMQNRPDV RQAEKELSAA
GLDVKVARAR FYPSLIVNAG VGYNAFNAKY LFSTPDSLIY NVAGDLVAPV INRSAIQADY
LTANAQQLQC VYNYQQVILN AYTEIVNRLS KVENYQASIE IKKQQLAALE ASVDSATKLF
QNARAEYVEV LLAQRDMMEA RMVLIETKQQ QLAAAITAYQ ALGGGSF
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