| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2798 |
|---|
| Symbol | |
|---|
| ID | 9139510 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 3630673 |
|---|
| End bp | 3632088 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003630819 |
|---|
| Protein GI | 296123041 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACTG AACTGCCCAA GTCGCAATTG ATCAGCAATA CTTCACCGAG CCGCCAGCAG
TCGCCAGTCG GGATCATGCT GAAGCTCTGT CTTTGCGTGA CGCTTTTGTG CCTCACAATG
ATCGACAGGG TTGTCGCACA GACCAGTCCT CCAGGTGAAC CGAAGGCGAA AGCTGCGGGT
AAGGCCGCAC AAACTCCCGA TCGCAATCGC GGGAAACCAT TACCGCCGGG TGTGCGCGAT
TACACATCTC GCAACTTTCT CATGCATACC GATCTTCCGC CGGAGGAGGC GAAAGAGTTA
CTCACCCGGC TCGAAACAAT GCTGACCTTG ATCTCGAAAT ACTGGGGCAA ACCCAATCGA
GCAGTCATCG AAATGTATGT CGTGAAAGAT CTCTCGGTCT GGCCGCCTGG TTCGATCGAT
GGGCGCGGGT TGCAAAGCAT CGAAGCGGGT GCAGGAGTCA CACTGGGTCA GACGGCGTTC
ATTGGAAACG AGGCCATTGA TGCCAAGGCG GTCGTTTACT CAGTGGCCGA CCGCGGGACA
CCGCAGCACG AAGCAGTTCA TGCCTACTGC CAACTGAATT TTGGACGAAC CGGCCCCACC
TGGTATTCGG AAGGGATGGC CGAGATGGGG CAATACTGGA AAGAAAAAGA CACTTCTGTA
GCAATCCACC CGGTTGTGTT CGATTATCTC AAAAAATCCG AACTCAAGTC GCTAGATGAG
ATTATTGCTC CTGGTCAGAC GACAGGAGAT AGCTGGGAAA ACTATGCCTG GCGCTGGGCT
CTGTGTCATT TACTGGCGAA CAACACCAAC TATGCGGCAC GTTTTCGGCC CCTGGGACTC
TCGCTACTTT CCAGCAGGCC GGGAAGCTTT GAATTGACCT ATGGCCCATC GGCTCGCGAA
ATCAGTTTTG AATATGATTT CTTCCTCAAG CACCTGGAAC AAGGCTTTCG AGCCGATCTG
TGCAGTTGGG ATTGGCAGAC CAAACCGGTG ACTGTCAAAG GGACAGCCAC CGTCCAATCC
AAGATTGATG CCAAAAAGGG ATGGCAGGCG TCGAGGCTCC TGGCCAAAGC CGGTGAAACG
TATCAATTCA CGACGACTGG CACCTGGAAA ACAGGGACTG AAGGGGAAGC GATTTCACCC
GCAAATGCCG AATCAGAAAC TGGTCGACTG GCAGGAGTCC TCTTCAACGA TTACGAGTTA
AGCGAACCCT TCCTGATCGA CCTGACCAAC GGCTGGACAG CACCCAGTGA CGGAGCCTTA
TATTTACGTT GTCACGAGGG TTGGGGCGCA CTTCAGGACA ACACTGGAAC TGTGGCTGTC
AAGATTAAAA GAGCAACAGA AAGTGTCCGC ACGCCTTCAA TTGGCGAGCC TGTAGAAACT
CTTCCCGCAC GGAAAGAAAA CGCTGCAGGA AAGTAG
|
|---|
| Protein sequence | MQTELPKSQL ISNTSPSRQQ SPVGIMLKLC LCVTLLCLTM IDRVVAQTSP PGEPKAKAAG
KAAQTPDRNR GKPLPPGVRD YTSRNFLMHT DLPPEEAKEL LTRLETMLTL ISKYWGKPNR
AVIEMYVVKD LSVWPPGSID GRGLQSIEAG AGVTLGQTAF IGNEAIDAKA VVYSVADRGT
PQHEAVHAYC QLNFGRTGPT WYSEGMAEMG QYWKEKDTSV AIHPVVFDYL KKSELKSLDE
IIAPGQTTGD SWENYAWRWA LCHLLANNTN YAARFRPLGL SLLSSRPGSF ELTYGPSARE
ISFEYDFFLK HLEQGFRADL CSWDWQTKPV TVKGTATVQS KIDAKKGWQA SRLLAKAGET
YQFTTTGTWK TGTEGEAISP ANAESETGRL AGVLFNDYEL SEPFLIDLTN GWTAPSDGAL
YLRCHEGWGA LQDNTGTVAV KIKRATESVR TPSIGEPVET LPARKENAAG K
|
|---|
| |