Gene Plim_2794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2794 
Symbol 
ID9139506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3624681 
End bp3628070 
Gene Length3390 bp 
Protein Length1129 aa 
Translation table11 
GC content57% 
IMG OID 
Productprotein of unknown function DUF1549 
Protein accessionYP_003630815 
Protein GI296123037 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0191241 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAATC GATCAACCAG GATCGAGCCG AATGCGGGAG AACCCGGTTT TCTCATGGCT 
GACTCATGGC TCACAACATG CGTTGTCTGG TGTAAAACGC CATGTCTCGC CGCATTGATT
CTGTTCCTCG TGGTTGCCTG TCACTGGGCG CGTGCTGCGG ATGAACCGGC TCCTGTCCAA
ACCAACTCTG TGTCCTTCAC ACCAGAGCAG TTGAACTTCT TCGAAAAGGA AGTTCGCCCA
GTGCTTGTTG AGCATTGCTA CAAATGCCAC TCTTCGGACA AGCAAAGCGG AAACTTGCGG
CTCGACAGCC GGGAGTTTCT GCTGACTGGT GGAGAATCCG GGGCGGCACT CGTTCCCCAT
CGACCCGCCG ATAGCGTGTT GATCTCAGCC ATCAACTACG ATGGTTACGA AATGCCACCC
ACGGGCAAAC TCCCCGCCCA GCAGATTGCC GCAATCACCC GCTGGGTCGA AATGGGTGCT
CCGTGGCCTG CGGGAGAAAA GGTCAAAGCC AGTGGTCGCC GCCCGGGTGT AATTACCGCC
GAAGATCGCC AGTGGTGGGC CTTTCAGCCA CTCCCCGTTC TGTTTGAAGG GGCACAACCC
ACGCCAGAAT TTGCTGGCCA TATTCACGAT TCGACCAGTC AGGTCATTGA TGATCGCATG
GCTCAAAAGC GGGCTCAGGA AAACTTTCCT CTCGACCCTG CAGGGGAAGC CTCCCGGCAA
GCTCTGATTC GCCGTGTGAC ATTCGACCTC ACGGGCCTCC CACCCACCTG GGACGAGGTC
GAGCAGTTCA TGGCCGATTC GGCTCCTGAT GCTTATGAGC GTCTGGTGGA TCGTTTACTG
GGCAGTCCTC GTTATGCCGA ACGGCAAGCA CGGTTCTGGC TCGATCTCGT CCGTTATGCC
GACAGCGATG GTTATCGGCT GGATGCTGCC CGGCCACATG TCTGGCGATA CCGGGATTAT
GTCATTCGCT CTTTTGCTGA CGATAAGCCC TACGACCGCT TCGTGCAGGA GCAACTGGCT
GGGGATGAAC TCTTCCCACA CGAGCCCGAA GCGATCGTGG CGACTGGTTT TCTCCGGCAT
GGAATTTATG AGTACAACAG CCGCGACGTA CGCACCCAGT GGAATCTCAT CCTGGATGAC
ATCACCGATA CCACGGGCGA TGTCTTTCTC GGCTTGGGCA TGCAGTGTGC CCGTTGTCAC
GATCATAAAT TCGACCCCAT TTTGCAGAAG GATTACTTTC GGCTGCGGAG TTTCTTTGCC
GGAATTCAGA CGCACGAACA ATTTCTGATT CCGAGCGATG CTGAACTTGC GGCTTACCAG
GAAAAGCTCG CCCCCTGGGA AGCAGCCACC AAGTCGATTC GCGAGGAGAT TTCTGCACTC
GAAGCCAAAT ATCGAGATCA AGGTCAGAAG CAGGCCGAAG GTCGCTTCCC CCCCGATATT
CAAGCGATTC TCGAGAAGCC GGTTGCCGAG CGAACGCCCA TCGAGAAGCA GTTGGCGGCG
CTCGCCTTTC GTCAGGTGGA GTACGAATGG GAGCGATTGG ATGGTCGTCT CAAAGGTGCC
GATAAAGAGC GGATTCTGGC TTTGCGTAAA GAACTGGCCA AGTTCGATTC CATCAAGCCG
CCAGCACTTC CTTTGGCCAC CTGTGTGACC GAATGGGGTC TCGATTGTGC TGAGATCACC
ATTCCGAAAA AGGGAAAAGA ACCCATTGAA CCCGGGTTCC TGACCATTCT CGATGCCTCG
CCAGCCACGG TACTTCCGAT TGACACGCCA CGAGGCAAGT CGTCTGGCCG GAGGGCGGCA
CTCGCGAACT GGCTCACTCG CCCCGATCAT CCATTGACGG CCCGGGTGAT GGTCAATCGT
ATCTGGCAGC AGCATTTCGG ACGGGGCCTG GCGGCCAACG CCAGCGACTT TGGCAGACTG
GGTTCTTTAC CGACACATCC TGAGTTGCTG GATGATCTTG CTTCGCGTTT TGTGGCGGGT
GGCTGGCGGA TGAAGCCACT TCATAAAGCC ATTGTGCTGA GTGAAACCTA TCGCAGATCT
TCCTCACATC CCCAGTTGGC CGAACTTCAG AAGATCGATC CCGAAAACAC GCTTTACTGG
CGAGGTGATG TCCGCAGGCT CGATGCCGAA CAGTTCCGGG ATAGCAGCTA TCTGGTTTCG
GGAGAACTCT CGCTCAAAAC CACCAGTGGC CCTGGTGCAC CCGCCGAAGC TCCTGTCCGT
TCGATTTTTC TGCGAACGAT GCGAAACACC CGCAATCCTG TGCTCGATGC TTTTGATGCT
CCCTTCTGGA TCACCAGCAG TGCTTCCCGG CACTCGACCA CCACTCCCGT GCAATCGCTG
CTCCTTTTCA ACAGCCAGTG GGCCTTACAA CGGGCGAAGG GATTGGCCGA ACGTGTGACG
AAAGCTCAGG GAGCGAAGCC TGCGGTGGAT GACCGCCAGA TCATCACCGA TCTTTATCGG
ATGACTTTGG GCCGAGACCC CGAATCGTTC GAGATCGACG CCGCCCTCGA CTTCCTGGGA
ACCCAGGCCA GCACGATCAA CATCGCCGAA GCGACCTCCG CCGAAGCGAA GTTCCTTCAC
GATAAAATCC CCTTCCGCGA TGGACATGCC GCTGTCGTTT CCAGCAAGCA GCTTCCCTTT
ATCGGGCCCG TCATCAAATC ACCGGAAGGA AGCGACTTCA CCATTGAGTC GTACTTCGTG
GTGCGTTCGA TCTACGAGAC GGGGGCTGTC CGTACGATTG CCGCCTGCTG GAATGGTGAC
ATGGCTGAGG CTGGCTGGAA CTTTGGAATT ACCGGCAAGG GAAGCCGGCG CAAACCTCAA
ACGCTGGTCA TGCAGATGGT CGGGAAGACA GCCGATGGCA AGACGGCTGA GGCGGCACTG
TTTTCTGATC ATCATATTCA GCTCAACCAG CCCTACTATG CGGCCGCAGC CGTCAAGCTC
GCTCGTAATG GGCAACCAGG GCAGGTCACG TTCTATTTGA AAGATCTGGC CAATGACGAT
GAACCATTGC TGATTGCGAC AGTGCCTCAT CAACTGGTGG GTGGGATCTG TGGAACCAAC
AGGCCTCTCA TGGTGGGTGG CCGCGATCGC ACGGAATCAG CCCGGTTTGA TGGCCTGGTC
GATGATGTCC GGATGAGTGC TGAAGCCCTG ACACCTGAGC GACTCCTCTT CACCAGTGAT
ACTTTGCAGC CCAGTACCAT GGCCTTCTGG CGGTTTGAAC CCACTCCCGG CCCCTTTGTC
GATGCCTCCG GCCATGATCG CCATCTGGCC GATCGACCAC CCAAAGGCGA AGGGGGGGCA
TCGAGTTCAC AAAAGACGGC CATCCGCGAA GTGCTCATTG ATTTCTGTCA TATCCTGCTG
AACTCCAGCG AGTTCATGTA CGTTCAATAG
 
Protein sequence
MLNRSTRIEP NAGEPGFLMA DSWLTTCVVW CKTPCLAALI LFLVVACHWA RAADEPAPVQ 
TNSVSFTPEQ LNFFEKEVRP VLVEHCYKCH SSDKQSGNLR LDSREFLLTG GESGAALVPH
RPADSVLISA INYDGYEMPP TGKLPAQQIA AITRWVEMGA PWPAGEKVKA SGRRPGVITA
EDRQWWAFQP LPVLFEGAQP TPEFAGHIHD STSQVIDDRM AQKRAQENFP LDPAGEASRQ
ALIRRVTFDL TGLPPTWDEV EQFMADSAPD AYERLVDRLL GSPRYAERQA RFWLDLVRYA
DSDGYRLDAA RPHVWRYRDY VIRSFADDKP YDRFVQEQLA GDELFPHEPE AIVATGFLRH
GIYEYNSRDV RTQWNLILDD ITDTTGDVFL GLGMQCARCH DHKFDPILQK DYFRLRSFFA
GIQTHEQFLI PSDAELAAYQ EKLAPWEAAT KSIREEISAL EAKYRDQGQK QAEGRFPPDI
QAILEKPVAE RTPIEKQLAA LAFRQVEYEW ERLDGRLKGA DKERILALRK ELAKFDSIKP
PALPLATCVT EWGLDCAEIT IPKKGKEPIE PGFLTILDAS PATVLPIDTP RGKSSGRRAA
LANWLTRPDH PLTARVMVNR IWQQHFGRGL AANASDFGRL GSLPTHPELL DDLASRFVAG
GWRMKPLHKA IVLSETYRRS SSHPQLAELQ KIDPENTLYW RGDVRRLDAE QFRDSSYLVS
GELSLKTTSG PGAPAEAPVR SIFLRTMRNT RNPVLDAFDA PFWITSSASR HSTTTPVQSL
LLFNSQWALQ RAKGLAERVT KAQGAKPAVD DRQIITDLYR MTLGRDPESF EIDAALDFLG
TQASTINIAE ATSAEAKFLH DKIPFRDGHA AVVSSKQLPF IGPVIKSPEG SDFTIESYFV
VRSIYETGAV RTIAACWNGD MAEAGWNFGI TGKGSRRKPQ TLVMQMVGKT ADGKTAEAAL
FSDHHIQLNQ PYYAAAAVKL ARNGQPGQVT FYLKDLANDD EPLLIATVPH QLVGGICGTN
RPLMVGGRDR TESARFDGLV DDVRMSAEAL TPERLLFTSD TLQPSTMAFW RFEPTPGPFV
DASGHDRHLA DRPPKGEGGA SSSQKTAIRE VLIDFCHILL NSSEFMYVQ