Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2762 |
Symbol | |
ID | 9139474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 3581979 |
End bp | 3585386 |
Gene Length | 3408 bp |
Protein Length | 1135 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | PAS sensor protein |
Protein accession | YP_003630784 |
Protein GI | 296123006 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.449168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCGCA TCCTGATTGT TGAACCACGA CCTTCCTTTC GTGAAGGTCT TCGTCAGACG CTGGTTGATG CCGGCTACGA GATTGAGACG CTTGATATCG ATCAGGATCT GCCGGCGGCA ATCCAGATCC GCCCGGCTCT GGTGGTTCTC GGTTGTGAAG CCATTGAGTT TCTCCCGCTG ATCAAATCTC AGTGCACGCC TCCTGTGCCA GTGCTGCTGC TGATCAAGGC CGGCGAGTTG GGATTGATTC TTAAAGCGGT TGATGGAGCG GCTGATCTGA TCTATTCATA CGAACGACCA CTGCAGGATG TACTGCAAGG CATCCAGCGA TTGACGAGGC CGCGCAGTGA TGACGTAGTG CCACAGTTAT CGCACCAGGA TCGACTGATC GTGGCACTCA GGTCGGTCTG TGATGATCTG AATCTGACGC ATAAGCGGCA CATTTCGGAA GTGCTCAAGC GTCAGTATGC CGAGCAGAAG CTGGTGGAGT CGGAATCGTT TTATCGGTCT TTAGTGGAGA CATTGCCCTA CGCGATGTTC CGTAAAGATC TGCATGGACG AGTGACTTTT GCCAACCGCA AGCTGTGTGA AATCCTCGGT TCCCCTCCGA ATGAGGTGGT GGGCAAGACC GATTACGACT TTTTCCCCAC GGATCTGGCC GATAAGTACC GGGCTGATGA TCGGTATGTC ACGGAAACGA GAGCACAGTT TGAAACGATC GAAGAGTTTG TGACACCTTC GGGAGAGGTG CATTACACAC ATGTGATGAA GAACCCGGTC TATGATGGTC GAGGGAATTG CGTCGGGATC CAGGGGATTT TCTCAGATGT GACTGATCGC AAACGAACAG AGATCGCTCT CGACCAGGAG CGGGATCTGC TCAATAACCT GATGAAAAGC ATCCCGGACA ACATCTACTT CAAGGATGTG CGGGGCAGAT ATCTGCGCAT CAATCAGGCG AAAGCCGCCG CGAGCGGATT GTCCGATCCG AGCCTGGCGA TTGGAAAATC GGATACCGAT TTCTTCTCAG CAGAGCACGC AGCGATTGCT CGTAAAGACG AAGAATATGT GATGCAGACC CGTCTGCCAT TGATTGGTAA GGAAGAACGG GTGGTCTGGA GTGATGGTCA TATCCGGTGG ATGTCGACCA CCAAATTGCC GTTGATTTCA CCAGCGGGGG ACGTGATCGG AACCTACGGA GTCTCACGCG ATATTACGCC GATGAAGCTG GCTGAACAGG CCTTGCGGGA AGCCAAAGAT GCGGCTGAAG CTGCAAACCG GGCGAAGAGT GATTTTCTCG CCAATATGAG CCATGAGATT CGCACACCCT TGAATGCCAT TATCGGTATG ACAGAACTGG TGATGGATAC CGATCTGAAG GTGGCACAGC GGGATTACCT GCGGATGGTG CTCGAATCGG GTGAATCGCT TCTGGGAATC ATCAACGACA TTCTTGACTT TTCGAAGATT GAGGCCGGTC GATTGCATGT CGATGAGCAA CCCTTCCGAT TACGCGATTC GCTGGGTGAC ACGATGAAAT CGCTCTCGAA CCGCGCTCAT CGCAAGAAGC TCGAGTTGGC GTTTCATGTC TCGCCAGATG TTCCCGATGA GGTTCGCGGA GATGCAGTCC GGGTGCGCCA GGTGATCATC AATCTGCTGG GGAATGCACT CAAGTTTACC GAACGCGGCG AGGTGGTTCT CGATGTTTCT GTCGAGAGTC GAACTGCAGA ACAGGTGACA TTGCATTTCA AAGTGCAGGA TACCGGGATC GGGATTGCCA AAGATAAATT TGAATCCATT TTTGAAGCGT TTGAGCAAGC CGATTCTTCG ACCACCAGGC GATATGGAGG GACAGGGCTG GGGTTGGCGA TATCGGCCCG GCTGGTGGAA TTGATGCAGG GGAAGATCTG GGTTGAAAGC GAAGTGGGTC AAGGTAGTAC CTTTCACTTT ACGCTCAATC TGGGTGTCGA AGCAGAAGGA AGTGTGCAGC CACTGGCCCA GGAGCCTCAA CTGCATGGCT TGCGTGTGCT GATTGTCGAC GATAACCAGA CGAATCGTAG GATTCTGGAA GAGTTGACGT TGTTGTGGGG GATGCGTCCA AGAATTGCCG CAGGAGCGAT CGAAGCCCGG CGAGAGTTGC AGCATGCGAT TGATCAAGGT GAACCCATTC GATTGATCAT TACCGATGCG CAAATGCCGG GAGAAGACGG GTTCAGTCTG ACGGCATCAA TTCGCAGTCT GGAAAACATG CCTGCCGTTG AAATCCTGAT GCTGACATCG GGGGATCGGC TGGAAGATCT CTCGCGGTGT CAGCAACTGG GGATTGCCGG TTATCTCATC AAGCCTGTGA AACAATCCGA GTTGTACAAC TCGATTGTAG GGATCATGGG GCAGGCACCT CGTGCTGTGC CCATGGCTTC GGCTATGGCT GTGCCGGAAA GATCGGCCAA TTCGCGGAGG ATTCTACTGG CTGAAGACAG TCTGGCCAAT CAGAAACTGG CACTGGGTTT ACTGGAGCGA TGGGGGCACC GGGTAGTGGT GGCCAGCAAT GGCATCGAGG CGATTGAACG CTATCGCAGT GAATCATTCG ACCTGATTCT GATGGATGTG CAGATGCCCG AACTCGACGG GAATGAAGCC ACCATGGCGA TTCGCGAGAT TGAAAGGCGG ACGGGAGAAC ATATTCCGAT CGTGGCGATG ACAGCGCATG CCCTGCAGGG GGATCGTGAG CAATGCCTGA AGGCCGGAAT GGATGATTAC CTGATGAAGC CGATACGGGC TCGTCAGTTG TTTCAGATGA TTGAGCAGGT CTGTAACGAT CATGCTCCAC GCTGGAAGCC GCTCTACCAG ATGACCAGTG AGGGTGTGGC GGCAAGAAGC GAAGAACATT GTGCTGAAGA GTCTGATCTG GATCAACAGG CGCATGCGGT GGAACCTCAG ACGGATTGCC AGTCAGTGAT TGGAGACTCG ATGAATGCAG CCGGTGCGCT CCAGACCATT GATGGTGGAG CCGAGTCGGT GGTGAAGTCG GAGGATTATG TTGACTGGCA GTTGGCTCTG CGTGCGACAA ATGGAGATCG GGCGCTTCTG GCAGATGTGG GTCAGGCTTT TCTTGAGGAG ACACCCTGGC TGCTGAACAA ACTCGATGAC GCGATCACCA CACAGGATAC AAAGCTGTTT CAAAGACTCA GCCATACACT CAAAAGTGCC TTTCGAACCT TTGGCGCGAA CAAACTGAGT GAGCAGTATG AGCAGATGGA AATGGACGTG AAGCGAGAAG GTCGATTACC CGAGGTCGAG GTGGTGGCCA GGTATCGACA ATCAGCCGAT CATGTCGTGG AGCGAATTGC CAAAGAGTTG CCACAGGTTT GTGCAGAGAC TGCTTCAGGC TCTGGCAAGG GGATGTGA
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Protein sequence | MPRILIVEPR PSFREGLRQT LVDAGYEIET LDIDQDLPAA IQIRPALVVL GCEAIEFLPL IKSQCTPPVP VLLLIKAGEL GLILKAVDGA ADLIYSYERP LQDVLQGIQR LTRPRSDDVV PQLSHQDRLI VALRSVCDDL NLTHKRHISE VLKRQYAEQK LVESESFYRS LVETLPYAMF RKDLHGRVTF ANRKLCEILG SPPNEVVGKT DYDFFPTDLA DKYRADDRYV TETRAQFETI EEFVTPSGEV HYTHVMKNPV YDGRGNCVGI QGIFSDVTDR KRTEIALDQE RDLLNNLMKS IPDNIYFKDV RGRYLRINQA KAAASGLSDP SLAIGKSDTD FFSAEHAAIA RKDEEYVMQT RLPLIGKEER VVWSDGHIRW MSTTKLPLIS PAGDVIGTYG VSRDITPMKL AEQALREAKD AAEAANRAKS DFLANMSHEI RTPLNAIIGM TELVMDTDLK VAQRDYLRMV LESGESLLGI INDILDFSKI EAGRLHVDEQ PFRLRDSLGD TMKSLSNRAH RKKLELAFHV SPDVPDEVRG DAVRVRQVII NLLGNALKFT ERGEVVLDVS VESRTAEQVT LHFKVQDTGI GIAKDKFESI FEAFEQADSS TTRRYGGTGL GLAISARLVE LMQGKIWVES EVGQGSTFHF TLNLGVEAEG SVQPLAQEPQ LHGLRVLIVD DNQTNRRILE ELTLLWGMRP RIAAGAIEAR RELQHAIDQG EPIRLIITDA QMPGEDGFSL TASIRSLENM PAVEILMLTS GDRLEDLSRC QQLGIAGYLI KPVKQSELYN SIVGIMGQAP RAVPMASAMA VPERSANSRR ILLAEDSLAN QKLALGLLER WGHRVVVASN GIEAIERYRS ESFDLILMDV QMPELDGNEA TMAIREIERR TGEHIPIVAM TAHALQGDRE QCLKAGMDDY LMKPIRARQL FQMIEQVCND HAPRWKPLYQ MTSEGVAARS EEHCAEESDL DQQAHAVEPQ TDCQSVIGDS MNAAGALQTI DGGAESVVKS EDYVDWQLAL RATNGDRALL ADVGQAFLEE TPWLLNKLDD AITTQDTKLF QRLSHTLKSA FRTFGANKLS EQYEQMEMDV KREGRLPEVE VVARYRQSAD HVVERIAKEL PQVCAETASG SGKGM
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