Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2758 |
Symbol | |
ID | 9139470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 3575405 |
End bp | 3577120 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | Sulfite reductase (NADPH) |
Protein accession | YP_003630780 |
Protein GI | 296123002 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.36234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTGAGC AGGTCGAACG CAGCAAGAAT GAGATCATCA AGGAAAATAG CCGGCAATTG CGTGGTTCCA TCCTGACGGA TCTGCAGAGT GAATCACCGG AATTCAGCGA AGACAGCCAG CAACTGCTGA AGTTTCATGG CATGTATCAG CAGGATGACC GCGATGTGCG GAAGGCCAAA AATCCGGATG GAACACCGAA GGGCAAGACG CATATCGTCA TGATTCGCGC TCGGATTCCG GGCGGAAATA TGACTGCCGA GCAGTTTCTG GGCATTCTCG ACTTGAGCGA GCAGTATGGT AATGGGGCCA TGCGGCTGAC GACCCGGCAA GGGATTCAGC TGCATTACAT CCCTAAGGGA AACACAAAAG AAGTCGTTAA AGGGATTAAC GACACGATGC TCACCACGCT CGCCGCGTGC GGCGACGTCA ATCGCAACGT GATGGCCTGC CCGGCTCCGA TTAAAGATCA GCCTCATGCA GCCATTCAGA AACTGGCCTA TGAGATGGCC GAGCATTTTC GTCCGAAGAC CACAGCCTAC CATGAACTGT GGCTGACTGA TGGCGAAGGG AACAACCACA ACGCGACCGA GGCGTTTGTG CCTGTCGAAG AACCGATCTA CGGTACGCAC TATCTGCCAC GCAAATTCAA GATGGCCATC GCTTTGCCCG ACGACAACTG CATTGACGTT TATGCCAACG ACCTGGGTTT GATTGCCGAT GTGCAAGAGG GCCAGATCGT GGGTTACAAC ATGCTCGTTG GTGGTGGCAT GGGGCGGACT CCTTCTGCAG AAAAGACCTT CCCTGCAGTG GGCAAGAAGC TCTGCTACGT CACTCCCGAA CAGGTCATTC CTGTGGCTGA AGCCGTGGTG AAAGTTCAGC GTGATTTTGG AAATCGTTCT GATCGAAAAG TGGCCCGCCT CAAGTACCTC ATTCATAACT GGGGCCTGGA TGCCTTCCGG GCCAAAGTGG AAGAGTACTA TGGCCAGGCT TTGACTCCAC CCAGTTCCGT AGATGTCAAA GGTGTCGAAG ACCATGTGGG CTGGTTCGAA CAGGGCGATG GTAAGCTGTT TGTCGGGATC AACATCGAGT GCGGGCGTGT GCGCGATACC AGTGAAGTTC AAGTGAAGAC CGGCCTGCGG GCCATTATCG AGAAGTACCG CATGCCAGTG CGGGCGACGG CTCTGCAGGG ATTGATCCTG TGTGATATTG ATCCTGCCGA TCGTGCCGAT ATCACAGCCA TGCTCAAGCA GTATGGTCTG AAGTCTGCTG AAGAATTGAC AATTCTGCGT CGCTTCGCCA TTGCCTGCCC TGCACTGCCG ACTTGCGGTT TATCGCTGAC CGAATCAGAA CGAGTGCTCC CGAGTGTGAT TGATCAGTTC GATGTCGAAA TGGCCAGGTT GGGGCTGCAG TCGGAGAAGA TCTCGGTTCA TATGACGGGA TGCAACAATG GCTGCGCCAG GCCTTATACG CCCGATATTG GCTTTGTGGG TCGATCTTTA GGGAAGTACA CCGTGTTTGT TGGCGGGAAT CCGGAAGGAT CGAGACTGGC CTTCATGTAC GAAGATTATG TGCCACTCGA AAAACTGGTG CCGACACTTG TGCCACTTCT GACGGGTTAC AAGGCCGATC GCCTGTCCGG AGAAGGTTTT GGCGATTACT GCGTACGTCT CGGAATTGAA GGCTTGAAGG AGTTGGCCAC TCAAGTGGAT GTCTAA
|
Protein sequence | MSEQVERSKN EIIKENSRQL RGSILTDLQS ESPEFSEDSQ QLLKFHGMYQ QDDRDVRKAK NPDGTPKGKT HIVMIRARIP GGNMTAEQFL GILDLSEQYG NGAMRLTTRQ GIQLHYIPKG NTKEVVKGIN DTMLTTLAAC GDVNRNVMAC PAPIKDQPHA AIQKLAYEMA EHFRPKTTAY HELWLTDGEG NNHNATEAFV PVEEPIYGTH YLPRKFKMAI ALPDDNCIDV YANDLGLIAD VQEGQIVGYN MLVGGGMGRT PSAEKTFPAV GKKLCYVTPE QVIPVAEAVV KVQRDFGNRS DRKVARLKYL IHNWGLDAFR AKVEEYYGQA LTPPSSVDVK GVEDHVGWFE QGDGKLFVGI NIECGRVRDT SEVQVKTGLR AIIEKYRMPV RATALQGLIL CDIDPADRAD ITAMLKQYGL KSAEELTILR RFAIACPALP TCGLSLTESE RVLPSVIDQF DVEMARLGLQ SEKISVHMTG CNNGCARPYT PDIGFVGRSL GKYTVFVGGN PEGSRLAFMY EDYVPLEKLV PTLVPLLTGY KADRLSGEGF GDYCVRLGIE GLKELATQVD V
|
| |