| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2735 |
|---|
| Symbol | |
|---|
| ID | 9139447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 3547963 |
|---|
| End bp | 3549096 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_003630757 |
|---|
| Protein GI | 296122979 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.184431 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGAAG GGATGCACCT CGAGACCAAT ACACCGGCTC CGGCAGCCGC CAAAAAGCCA
AAATCCAAAT GGATTAAGCC AGTCGCTTTC ATCGCAGGGA CTGCTGCCAT TCTCACTGCC
GGCGGATTCG TCATGCAGTC GATGAGCCCG AAAGTGGGTC AGGCTGCGAC GGAAACAGCT
GGAAAGGCTA CGCCAACCAC AGATCGCCCG GTGAAGGTGA TGGCTCGCGT TAATAAGGAA
ATCATTCCTT TTGACATGGT CGCTGAAGAA TGCGTTGCCC GATATGGCAA GGAAGTTCTC
GACGACATTA TCAATCGCAC CATGATCCAG CAGGCCTGCG AAGCCGCTGG CGTGACCGTG
ACCGAAGAAG AAGTCACCGC CGAAATCAAT CGCATTGCCA AGCGTTTCAA CCTGGATGTC
AACAACTGGT ATCAGATGCT TCAGGCTGAA CGCGGCATCA ATCCTCAGCA GTATCGCCGC
AGCGTGATCT GGCCGATGCT GGCACTGAAG AAGCTCGCCA GCGAAAAAAT CGACATCAAG
GAAGAAGAGC TGAATCGCGC CTTTGTTCGC AACTACGGCC CTCGCGTCAA GGCCCGCATG
ATTCTCATGG ATAACCTCCG CCGCGCGACG ACCGTGTGGG AAAAGGCGAA TGCTGACGCT
GATAACTTTG AAAAGTACGC TCAGGAATTC TCGATCGATC CCCAGAGCCG GGCACTTGGT
GGCTCCGTCC CACCGATTCC CAAGTACTCT GGCAACGACA GCCTCGAAAA GGCCGCCTTT
GCTCTGAAGG AAGGCGAAAT CTCCGGCGTG ATCGAAGTGG GCCCCAGCCG CTTTGCGATT
ATCAAGTGCG AAGGCCGCAC GGTTCCTACG GTCAACGAAC TGACTCAGGA AATCCGCGAT
TCACTCTACG ACGAACTTGC GGAACAGAAG ACACAGGTCT CTGTCGCCAA GACCTTCGAA
GAAATCCAGA AGTCGACACG CATCGACAAT TACCTGACTG CCACAGTGAC CGGCCCGGAT
CGTGTTCCCG CCGCCAATGC TCCTGGTGCG AACGCACCCG GTGCTCCTCA GCAGCCAGCC
GCTCCGACAG GCGCCGTTCG CCTCGGAAAT CGTCCTGCGA ATAATGGCAA CTGA
|
|---|
| Protein sequence | MGEGMHLETN TPAPAAAKKP KSKWIKPVAF IAGTAAILTA GGFVMQSMSP KVGQAATETA
GKATPTTDRP VKVMARVNKE IIPFDMVAEE CVARYGKEVL DDIINRTMIQ QACEAAGVTV
TEEEVTAEIN RIAKRFNLDV NNWYQMLQAE RGINPQQYRR SVIWPMLALK KLASEKIDIK
EEELNRAFVR NYGPRVKARM ILMDNLRRAT TVWEKANADA DNFEKYAQEF SIDPQSRALG
GSVPPIPKYS GNDSLEKAAF ALKEGEISGV IEVGPSRFAI IKCEGRTVPT VNELTQEIRD
SLYDELAEQK TQVSVAKTFE EIQKSTRIDN YLTATVTGPD RVPAANAPGA NAPGAPQQPA
APTGAVRLGN RPANNGN
|
|---|
| |