Gene Plim_2718 details

Gene Information

• Locus tag: Plim_2718
• ID: 9139430
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 3527537
• End bp: 3528304
• Gene Length: 768 bp
• Protein Length: 255 aa
• Translation table: 11
• GC content: 56%
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: YP_003630740
• Protein GI: 296122962

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.15322
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGATTTC AGAACCGTGT TGTTTTGATC ACTGGAAGTG CGGCTGGGAT TGGTGCCGGC 
TGTGCCCAGG TATTTCTGGA CGAAGGAGCG AGAGTCATCT CGTTGGATCG CGATCAGACT 
GCACTGGAGA AATGGCTCGA AAACCTGGCT CCTGCACAAC GCGAGCAGGT GTGGCCGATT 
GTCTGTGATG TGGCCCATAC ACCCCAACTG CAGAATGCAA TCCAGTCGGG TATCCAACGT 
TTTGGTCGCC TGGATTGCCT GATTAACAAC GCAGGGATCC ATCCTCCCGC CTTGACGATT 
GCCGAAACAT CTCTGGAACT GGTCGAGCAC GTGCTGCGAG TCAACTTTAT TGCCACGTTC 
GCCGCCAGTC AGGCGGTCGT TGAGGAACTC AAAAAGACTC GCGGCACGAT CATCAATATC 
TCATCGATGA CGGCGGTCCT TGGTCAGGAA AACTCAACCG CGTATGCGGC TTCGAAGGGT 
GCCCAGGTGA GCTTCACCAA ATCGCTGGCC CTGGAGCTGG CACGCTATGG AGTGCGGGTG 
AATTCCATTC TTCCCAGTAA TGTGGATACG CCTTTGATGC GTTCCTGGGC CGCTTCTCTT 
GCTGATCCGG AAGCGGCTCT CGAGCGAGTG GCCCGCTTAC AACCCTTGGG ACGGATGGCC 
ACCCCGGAGG AAATCGGAAA AATCGCTCTC TTTCTGGCCA CTGAGGACTC CAGCTTTCTC 
ACTGGACAGG CCATAGAAGC CGATGGCGGG GCAGCACTGG ATTATTAG 

 

Protein sequence

MRFQNRVVLI TGSAAGIGAG CAQVFLDEGA RVISLDRDQT ALEKWLENLA PAQREQVWPI 
VCDVAHTPQL QNAIQSGIQR FGRLDCLINN AGIHPPALTI AETSLELVEH VLRVNFIATF 
AASQAVVEEL KKTRGTIINI SSMTAVLGQE NSTAYAASKG AQVSFTKSLA LELARYGVRV 
NSILPSNVDT PLMRSWAASL ADPEAALERV ARLQPLGRMA TPEEIGKIAL FLATEDSSFL 
TGQAIEADGG AALDY