Gene Plim_2717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2717 
Symbol 
ID9139429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3526347 
End bp3527258 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content51% 
IMG OID 
Productprotein of unknown function UPF0187 
Protein accessionYP_003630739 
Protein GI296122961 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0718878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAAT ACAACCGTTA TAGCTGGTGG AAGACGGCAT TTTCATTTCG CGGAACCGCT 
TTGCCCCGAG CTGGCTGGCG TGTCCTCACC TGTGTGCTCT ATGCACTGCT TGTGCAGGCC
ACATTTGAAC TGGGAAGTGA TCTCCAGTTG TATGATGAAC AGCGATTTCT AGGGATCGAT
CCTGTGGGGC ATGCCGTCGT TGGTTCGCTC CTGGGATTCC TGATTGTCTT CCGCATGAAC
TCTTCGAATA ACCGTTATTG GGAAGGGCGC TCTCATTGGG GTCAGTTGAT CAACAGTTCG
CGAAATCTCG TACGTTTCGG CTGCGAGTAT GGCGAGCGCG GTTCAACCCT TTCGAGGTTA
GTGGCCGGGT ATGTGATCTC ACTGAGGCGG TCATTGCATG GTCAACGCGA TACCGAGGAA
GTCGATGTTT ACCTGCCAGC GGAACTTTGC GAGCAGGTTT CTCGGTTCGG AAACATTCCC
ACGGGGGTCA CATCTGCCAT CAGTCACTGG ATTGGCGAGC AGTATCGGAA AGGAAAGCTC
GATTCGATGC AGGTTCGCCA CATGGAAGAC CAGCTTTCCA AAATGGTCGA TGCTCAGGGT
GGGTGTGAGA AAATCCAGAA AACACCTTTG CCATTCATCT ATGTGGCGAT GATCAAGCAA
CTGATTCTCG CCTATTTAAT CACCTTGCCT CTTGTCTTAT GCGAACGCTG TGGCTGGTGG
TCTCCTGTGT TAATGTTTGT TGTTTCGCTG GCACTGCTGG GTATGGAAGA AGCTAGCGTT
GAAATTGAAG ACCCCTTTGG TTCCGATGGC AATTGCCTCG ATCTCGAAGC GTTGACATTG
ACCATCGCTC GTGATGCCGG TCAGTTGGCA CTATTTAAAC CCGTATTTAT ATGTGACGAT
CAGCACGATT AA
 
Protein sequence
MIEYNRYSWW KTAFSFRGTA LPRAGWRVLT CVLYALLVQA TFELGSDLQL YDEQRFLGID 
PVGHAVVGSL LGFLIVFRMN SSNNRYWEGR SHWGQLINSS RNLVRFGCEY GERGSTLSRL
VAGYVISLRR SLHGQRDTEE VDVYLPAELC EQVSRFGNIP TGVTSAISHW IGEQYRKGKL
DSMQVRHMED QLSKMVDAQG GCEKIQKTPL PFIYVAMIKQ LILAYLITLP LVLCERCGWW
SPVLMFVVSL ALLGMEEASV EIEDPFGSDG NCLDLEALTL TIARDAGQLA LFKPVFICDD
QHD