Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2717 |
Symbol | |
ID | 9139429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 3526347 |
End bp | 3527258 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | protein of unknown function UPF0187 |
Protein accession | YP_003630739 |
Protein GI | 296122961 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0718878 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCGAAT ACAACCGTTA TAGCTGGTGG AAGACGGCAT TTTCATTTCG CGGAACCGCT TTGCCCCGAG CTGGCTGGCG TGTCCTCACC TGTGTGCTCT ATGCACTGCT TGTGCAGGCC ACATTTGAAC TGGGAAGTGA TCTCCAGTTG TATGATGAAC AGCGATTTCT AGGGATCGAT CCTGTGGGGC ATGCCGTCGT TGGTTCGCTC CTGGGATTCC TGATTGTCTT CCGCATGAAC TCTTCGAATA ACCGTTATTG GGAAGGGCGC TCTCATTGGG GTCAGTTGAT CAACAGTTCG CGAAATCTCG TACGTTTCGG CTGCGAGTAT GGCGAGCGCG GTTCAACCCT TTCGAGGTTA GTGGCCGGGT ATGTGATCTC ACTGAGGCGG TCATTGCATG GTCAACGCGA TACCGAGGAA GTCGATGTTT ACCTGCCAGC GGAACTTTGC GAGCAGGTTT CTCGGTTCGG AAACATTCCC ACGGGGGTCA CATCTGCCAT CAGTCACTGG ATTGGCGAGC AGTATCGGAA AGGAAAGCTC GATTCGATGC AGGTTCGCCA CATGGAAGAC CAGCTTTCCA AAATGGTCGA TGCTCAGGGT GGGTGTGAGA AAATCCAGAA AACACCTTTG CCATTCATCT ATGTGGCGAT GATCAAGCAA CTGATTCTCG CCTATTTAAT CACCTTGCCT CTTGTCTTAT GCGAACGCTG TGGCTGGTGG TCTCCTGTGT TAATGTTTGT TGTTTCGCTG GCACTGCTGG GTATGGAAGA AGCTAGCGTT GAAATTGAAG ACCCCTTTGG TTCCGATGGC AATTGCCTCG ATCTCGAAGC GTTGACATTG ACCATCGCTC GTGATGCCGG TCAGTTGGCA CTATTTAAAC CCGTATTTAT ATGTGACGAT CAGCACGATT AA
|
Protein sequence | MIEYNRYSWW KTAFSFRGTA LPRAGWRVLT CVLYALLVQA TFELGSDLQL YDEQRFLGID PVGHAVVGSL LGFLIVFRMN SSNNRYWEGR SHWGQLINSS RNLVRFGCEY GERGSTLSRL VAGYVISLRR SLHGQRDTEE VDVYLPAELC EQVSRFGNIP TGVTSAISHW IGEQYRKGKL DSMQVRHMED QLSKMVDAQG GCEKIQKTPL PFIYVAMIKQ LILAYLITLP LVLCERCGWW SPVLMFVVSL ALLGMEEASV EIEDPFGSDG NCLDLEALTL TIARDAGQLA LFKPVFICDD QHD
|
| |