Gene Plim_2712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2712 
Symbol 
ID9139424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3520399 
End bp3521646 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content56% 
IMG OID 
ProductFAD dependent oxidoreductase 
Protein accessionYP_003630734 
Protein GI296122956 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAGTTG ATGTTGTGGT CGTTGGTGGT GGCGTTGTCG GGGCCATGTG TGCACGTTAT 
CTCGCCAAAA AGAATCTCTC TGTAACAGTT GTCGAGCAGG GGACCATTGG GGGCTTCTGC
TCCAAAGGGA ACTGCGGATA TGTCAGTCCC AGCCATGTCC TTCCCCTGGC AGAGCCCGGT
GTTCTGCTGA AGACACTTAA GTCGATGACG ACCCCCGATT CTCCATTCCA CATCCGTCCC
AGGCTTGACC TGCCTCTGCT GGGCTGGCTG ACCAACTTTG CCCGCCGCTG CAATGAGAAG
GACATGATGG CCGCCGGTCT GGCACTCAAC ACCATCCTGC GATCCTCATT TGACGAATAC
AAAACGGTCC TTGCGGAAGA TGGTATCGAG TGCGAATGGC AGAACGATGG CATTCTCTTC
GTCTATCGAA AAGCCTCTGA GTTTGAAGCC TTCTGCAAGA CGGATGACAT GCTGGCCGAA
AAATTTGATC GGCCTTCTCG TCGCATTATT GGCGATGAAG CTTTGATGGA ATTTGAACCC
GCTCTCAAAC CGGGGAACAC TGGAGCCTTC CTCTATGAAT GCGATGCCCA TCTGCATCCT
GAGAGGTTGA TGAGCCAGAT GCGTTCGAAC TTAATGAATC AGGGCGTTTC ACTGCTCGAA
GGCACCAAGG TCGAAGAGAT CGTGACCGAA GCTGGACAAG TTCGCTCGGT CAAAACCAGC
CAGGGGGAAA TCGAGGCAAA ACATGTTGTC CTGGCCGCTG GTGCCCTCTC GCCCATGTTC
CAGAAGGCGC TCAAATGCTC GATCCCCGTT CAGCCGGGGA AGGGCTTGTC GATTACCATG
CAAAGGCCCG CCGTCTGCCC GCGCGTCCCG TTGATCTTCC ATGATCACCG TGTCGCCATC
ACACCTTTTC AAACGGGCTA TCGGATCGGC TCAACCATGG AATTCGCCGG TTACGACACC
ACCATTAATC CCCGCCGCCT CAAGCTCCTG ACAGAGGGAG CCAAGCTGTA TCTCAAAGAT
CCTGTAGGCC AGCAGGAAGA AGAGCCCTGG TGGGGCTGGC GACCTATGAC TTACGACAGT
GTGCCAATCA TCGGGCCAAC CCCTAAGGTG CGTGGTGGCT GGCTTGCGAC AGGACACAGC
ATGCTCGGAA TCTCGCTGGC CTCCAGCACT GGCAAGTTGA TTGCCGAGAT GATTACCGGT
GAAAAGCCCC ACATCGACCC CAAACCGTAC GCCGTCACAC GCTTTTAA
 
Protein sequence
MAVDVVVVGG GVVGAMCARY LAKKNLSVTV VEQGTIGGFC SKGNCGYVSP SHVLPLAEPG 
VLLKTLKSMT TPDSPFHIRP RLDLPLLGWL TNFARRCNEK DMMAAGLALN TILRSSFDEY
KTVLAEDGIE CEWQNDGILF VYRKASEFEA FCKTDDMLAE KFDRPSRRII GDEALMEFEP
ALKPGNTGAF LYECDAHLHP ERLMSQMRSN LMNQGVSLLE GTKVEEIVTE AGQVRSVKTS
QGEIEAKHVV LAAGALSPMF QKALKCSIPV QPGKGLSITM QRPAVCPRVP LIFHDHRVAI
TPFQTGYRIG STMEFAGYDT TINPRRLKLL TEGAKLYLKD PVGQQEEEPW WGWRPMTYDS
VPIIGPTPKV RGGWLATGHS MLGISLASST GKLIAEMITG EKPHIDPKPY AVTRF