Gene Plim_2711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2711 
Symbol 
ID9139423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3518296 
End bp3520212 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content53% 
IMG OID 
Productflagellar hook-associated protein 3 
Protein accessionYP_003630733 
Protein GI296122955 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCTGG GAAACATCGG TATCGGTCGA ATGCCGAACA GCCTGCTCTA CAGCAATGCC 
AATCGCGATC TGCAAACAGG CACCAGTTTG ATCTCGCGTT TGCAGCAGCA GATCAATACT
CAGCAGAAAT ACAATCTCCT TTCAGAGAAT CCTACCGCCA CACGCCAGAC TTCGTCTTTG
CAATCGTTGT TAGAGCGAGT TCAAGGGGTT CGCAGCCAGC ATACTTACAA TCAGGGATTT
CTGAGTGCGG CCGACAATGC CCTGGGTGCT GTGAATGATG TGGTCGTGCA AGCAAAAGGA
ATTTTGCAGA CAGGGATTGG CTCGACATCG ACGCCGGAAG AAAAAATCGG CCTCGCAAAT
GAAGTCGCCA CATTGATTCA AAGTGCTCTG AACTCAGCCA ATACGCAGTA TCAGGATCGT
TTTTTATTCA GCGGTACAGC CACTGGAGTT TCTCCCTTCG ATCGTACCGG CGACACGGTG
ATTTATCGTG GAAATTCGGG AGAAGTCAAA GCCTTTGTGG ATGTCAATCA ACTGGTTTCG
ACATCCCTCT CCGGAATTGA TGCCTTTGGT GGCATCTCAC AACCGAATGT CACTGCACTT
TCACCAGCGC TCGAACTGAC GACCCCGCTC TCGGCACTGA AAAATGGGGC CGGCGTGAAT
CTGTCTTCGC TGACAGTGAC TGTCGACAAC GGGACTCCCA TTGAGAAGAC GATCGATTTA
AGTACCGCTG TCACCATTGG CGATCTCAAG ACCCGCATCG AAGCCGCCTT TGCGGGAGAA
GCCGAGACCG TGACGGTGGA TATTGATCCT CTCAGTCCTG GCGGGCTCCG AATTACACCC
TCCAATGGTA CGGTAGCAAT CGCAAATAGC GGCAGTGGCA CGACAGCCAC ACAATTACGA
TTGGCGACAG GCCCTGTCGC TGTGGCTCAG GGGGGAAGCC TCGAACCAAC CGTCACTCTT
TCGACCAGTG TGGCGGCCCT TAATGGAGGT GCGGGAATTG GTGCGACCGC AGGAACTGGT
CTGCGGATTG TGAATGGAGA GACCACCACG ATTGTCGATC TCGATGGTGC TACGACCGTA
CAACAGGTGT TGCAGCGAAT TCGAGCGGCT GACCCGAATG TCTCTGCAGA AATCGATCCA
GCCGGTCGCG GCCTGATTGT CGGAACTCGA CTGAGTGGCG TGAATTTCTC GATCGGAGAG
AATGGCGGCA CCAATGCGAC AGGCCTGGGG CTGAGAACAT TCACTGGCGA GACATCGCTT
TCGCAGCTCA ATCTGGGCAA AGGAGTCGTC TTTACACCCG GCTCGCCAAT CAGCATCACC
CGCCGGGATG GAACGACTAC GAACATCGAT CTCTCGTCGG CCACTACCAT TCAGGATGTG
CTCAATCTCT TCAATGCGGC TGACCCGGGT GTATTTACTG CGAGCCTGAA TGCAGTTGGT
AATGGTATCT CTTTGACCGA TTCATCGGGA GCCGGGCCAC TGACTGTCGC TGCCACCGAG
AGTGCCATCG CTTTAGGGAT TGACGGAACC GAAAACACAG GCGCAACCGG TGTACTGACT
GGAGATGACT TGAATCCTCA GCGAACAGGT GGTGTGTTCG ATTTGCTGAT CTCTCTCGAA
AACGCACTCC GCTCAAATGA TAATGTTGAG CTGGCGAGAC TCTCGCCTTT ACTTGAGAAA
GCCTCGGGCC AGATCACGAT ATCTCGGACA GAAATTGGTA CAAGGCAACA GTTGATCGAT
GAAGTGGGGA ATCGACTCGA TGACCAGAAC CTGCTGACCA AAGAGACGTT ATCAAACATC
TTTGACACAG ACCTGACTGA AGCTGCGACA CAACTTCTGC AACTCCGGCA AGTTTACGAA
GCTTCCATGC AACTCACGGC TCAGACGCTG CAGTTAAGCA TTCTCAACTA TCTTTAA
 
Protein sequence
MALGNIGIGR MPNSLLYSNA NRDLQTGTSL ISRLQQQINT QQKYNLLSEN PTATRQTSSL 
QSLLERVQGV RSQHTYNQGF LSAADNALGA VNDVVVQAKG ILQTGIGSTS TPEEKIGLAN
EVATLIQSAL NSANTQYQDR FLFSGTATGV SPFDRTGDTV IYRGNSGEVK AFVDVNQLVS
TSLSGIDAFG GISQPNVTAL SPALELTTPL SALKNGAGVN LSSLTVTVDN GTPIEKTIDL
STAVTIGDLK TRIEAAFAGE AETVTVDIDP LSPGGLRITP SNGTVAIANS GSGTTATQLR
LATGPVAVAQ GGSLEPTVTL STSVAALNGG AGIGATAGTG LRIVNGETTT IVDLDGATTV
QQVLQRIRAA DPNVSAEIDP AGRGLIVGTR LSGVNFSIGE NGGTNATGLG LRTFTGETSL
SQLNLGKGVV FTPGSPISIT RRDGTTTNID LSSATTIQDV LNLFNAADPG VFTASLNAVG
NGISLTDSSG AGPLTVAATE SAIALGIDGT ENTGATGVLT GDDLNPQRTG GVFDLLISLE
NALRSNDNVE LARLSPLLEK ASGQITISRT EIGTRQQLID EVGNRLDDQN LLTKETLSNI
FDTDLTEAAT QLLQLRQVYE ASMQLTAQTL QLSILNYL