| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2688 |
|---|
| Symbol | |
|---|
| ID | 9139400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 3481814 |
|---|
| End bp | 3483163 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | cytochrome bd ubiquinol oxidase subunit I |
|---|
| Protein accession | YP_003630710 |
|---|
| Protein GI | 296122932 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.367978 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATTCGT TGCTCATCGC TCGATGGCAG ATGGCCTTCA CGCTTGGCTC GCACATCATT
CTGGCCTGCT TAGGTGTCGG TTTACCCGTT CTCATGCTGT CAGCCGAGTG GCTTTCGCTG
CGCACCAATG ATCCTCTCTG GCGGGCACTG GCACACCGCT GGTCGAAAGC CTTTGCTGTG
CTCTTTGCTG TCGGTGCGGT TTCCGGGACA GTTCTCTCAT TTGAACTGGG CATTCTCTGG
CCTAAGTTTA TGGGAACTTT TGGCAGCGTG ATTGGATTGC CATTTACTCT CGAAGGTTTT
GCCTTCTTTC TGGAGGCGAT CTTTGCCGGG ATCTATCTTT ATGGCTGGAA TAAGCTTCCC
CCTCGCATCC ACTGGTGGAC TGGCGTGCCG ATAGCCCTCT CTGGTGTGGC TTCGGCCTCC
TTTGTTGTCA CTGCGAATGC CTGGATGAAT GCGCCGCGCG GTTTCACAAT GCGGGATGGT
GTGGTTGTCG ATGTCGATCC GCTGGCAGCA ATGACCGGGC CAACGGCCGC CGTCCAGATT
GTCCACATGC TGCTGGCGGC TTACATGGTG ACGGGTTTTC TGGTGGCAGC TTTCTATGCA
TGCGTACTCT GGAATAAACC TACCTGTCTC TATTCTCGCA GGGCGATGTT GCTGGCGTTG
TGGATGGGAA CACTGGCCAG TTTTCCACAG GGTCTGGCAG GAGACTGGGC AGCGAAAACA
GTAGCTCGCA CTCAGCCGAT TAAGCTGGCA GCCATGGAAG GGCAGTTCAA AACCGAAACG
GGGGCTCCCC TTCGCATTGG CGGCTGGCCG GATACGACCA CTCGCGAAAC CAATTATGAC
ATTGAAATTC CTTACGCGCT GTCAATCCTT GCTTATGGTG ATCCTCACGC GACAGTACAG
GGCCTCGATG ATTTTCCACG AGAAAACCAG CCTCCAGTCG TCGTCGTGCA TATCGCCTTT
CAGATCATGG TGGGGCTGGG GACTTTACTC ATGGCGTTAG GTGGCTGGAC AATCCTCTCG
TGGTGGATGA AATGGCATCC CGCCGACAAT CGCTGGGTTT TAATGGCGAT CATCGCCTCC
GGCCCGGCGA CAGTGCTCGC GATGGAAGCA GGCTGGGTCG TGACGGAAGT TGGCCGACAG
CCCTGGATTG CCCATAACGT GATGCGTACC AAAGACGCCG CCTCACAAAT CCCTGGGCTG
GAATGGCTCT TTTTAGCGAC GCTGGCCATC TATCTGGCTT TATTCGCTGG CTTGACCATT
GTCCTCCAAT TATTGGCGGT GCAGCCGATA CCAACGTCTT CGAATTTGTC TTCCAACCCG
GCAGCGTCAG ATCAAAGCTC TTTGTCATGA
|
|---|
| Protein sequence | MDSLLIARWQ MAFTLGSHII LACLGVGLPV LMLSAEWLSL RTNDPLWRAL AHRWSKAFAV
LFAVGAVSGT VLSFELGILW PKFMGTFGSV IGLPFTLEGF AFFLEAIFAG IYLYGWNKLP
PRIHWWTGVP IALSGVASAS FVVTANAWMN APRGFTMRDG VVVDVDPLAA MTGPTAAVQI
VHMLLAAYMV TGFLVAAFYA CVLWNKPTCL YSRRAMLLAL WMGTLASFPQ GLAGDWAAKT
VARTQPIKLA AMEGQFKTET GAPLRIGGWP DTTTRETNYD IEIPYALSIL AYGDPHATVQ
GLDDFPRENQ PPVVVVHIAF QIMVGLGTLL MALGGWTILS WWMKWHPADN RWVLMAIIAS
GPATVLAMEA GWVVTEVGRQ PWIAHNVMRT KDAASQIPGL EWLFLATLAI YLALFAGLTI
VLQLLAVQPI PTSSNLSSNP AASDQSSLS
|
|---|
| |