Gene Plim_2678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2678 
Symbol 
ID9139390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3469810 
End bp3470859 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content52% 
IMG OID 
Productprotein of unknown function DUF1559 
Protein accessionYP_003630700 
Protein GI296122922 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.28415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCGTT TTCGAGGGTT TACGTTGATT GAGTTGCTGG TGGTCATCGC AATTATTGCG 
GTGCTCATTG CCTTACTTCT TCCTGCGGTT CAGCAGGCAA GAGAGGCGGC TCGACGGACA
CAGTGCCGTA ACAATCTCAA GCAACTTGGT CTGGCCATGC ACAACTATCA TGACCAGTCG
AACATGTTTC CGATGTCAAC GACACGCGTC ACTAGCTCGG GTCAATCGAC AACAACCGCA
GCCAGTTGGA TTGTCCGACT GTTCCCCATG ATGGATCAGA CAGCGGCCTA CAATTCACTG
GCCTTTACTG ACAACGATTT CACGATGGAA CGTGGTAAGA ACCGCGCCTG GCAGACCATG
AGCAGTTTGC GAGTTGCGGG TCTCAATTGC CCATCAAGTC CCTTGCCTCA AACAAGAACT
CAAAACACCA ATACAGCCAC GCGCGGCTTA ACAACGGGTG TCCCGAACTC TATTGCAATT
CAGACAACGA ATTATGTGGG CATTGCCGGT GCCTACGATG CACCAGCTGG TGGGACGGCA
AATGACACGA TCTGGGAAGG GGCTCATGGT CGTCAAGTTT GGAACGGGCT GATCAACCCT
CCCATTAAGG GTTTCTCGAC AGTTGGCTTG CAGAAGGTGA CAGATGGTTC CACAAATACT
GTGATGGTGG GTGAGCAAGG CAACTTCCGA AAGGATTGCA GCGGCAATCC GGTTGATCGT
CGGACCAGTA ACTCGAATGG TGGTCTGTGG GCTGGAGGGC CTGGTGGAGA AGATCCGGCT
GATCAATACT ATGGTTTCTG GGGTAATGTC ACAAGTTTCC GGGCTCCGGC TGGCATCAAC
TATGACGCTG ACTGCAGCAA TCCATTCGGT ACTGTGCCCT ACTGGTATGG CGATCCCGGT
TACCACCACG TCTTTAATTC GGCTCACACG GGTGGTGCTC ACTTCCTGTT CGCAGATGGT
TCTGTCCGTT TTCTATCACA GAACATGTCA CAGTCCATTT TGAATGCCCT GTGCAACAAG
AACGACAACA CTCCAGTTGG CGAATTCTAA
 
Protein sequence
MPRFRGFTLI ELLVVIAIIA VLIALLLPAV QQAREAARRT QCRNNLKQLG LAMHNYHDQS 
NMFPMSTTRV TSSGQSTTTA ASWIVRLFPM MDQTAAYNSL AFTDNDFTME RGKNRAWQTM
SSLRVAGLNC PSSPLPQTRT QNTNTATRGL TTGVPNSIAI QTTNYVGIAG AYDAPAGGTA
NDTIWEGAHG RQVWNGLINP PIKGFSTVGL QKVTDGSTNT VMVGEQGNFR KDCSGNPVDR
RTSNSNGGLW AGGPGGEDPA DQYYGFWGNV TSFRAPAGIN YDADCSNPFG TVPYWYGDPG
YHHVFNSAHT GGAHFLFADG SVRFLSQNMS QSILNALCNK NDNTPVGEF