| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2667 |
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| Symbol | |
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| ID | 9139379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 3452844 |
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| End bp | 3454499 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | sigma-54 factor interaction domain-containing protein |
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| Protein accession | YP_003630689 |
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| Protein GI | 296122911 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATG TCCGCAGTGA GCCTCTGGTC TCAGACCCCA AACGCCTGCT CCTTGATCTG
GCGCGAGAAC ATTCCGTTGA GGGCTTGCTC AACCTGATTG TCAGCCGACT GGCAGAGCAG
AAACGCATCG CTCTGGCCCG CATCTGGTTA TCGCAACCGA CAAGCGAATG CCGTGGCTGC
TCGACACAGG AGGTGTGTCA GCACCAGACA GAGTGTCTGA AACTGGTTGC CAGTCGTGGA
TCCTCGCTGA CAACGCCCTC GATCACCTGG ACTGCGGTGG ATGGGGCTTT CCAGTATATG
CCCTACAGCG TGCGCAAAGT GGGACGGATC GCTGCCACGG GACTGGCCAT CGAAGAACCA
GAGATCCAGG AACCTCTACC AGAATGGATT GCACGTCCGG AGTGGGTACG AGCCGAAGGG
ATTCGAGGCT TCGCCGGTCA ACCACTGATC CACAGGGGAA AAGTTCTCGG GGTACTCGGA
GTCTTTGCCC GGCAGATTAT TGGCGAAGAA TGCATGGGCT GGCTGCGCAT GATTGCCGAC
CACGCGGCGG CAGCAATCGT TACCGCTCGA GCCTTTGCCG AAATTGAAAG TCTTCGTAAG
CGTCTGGAAT TGGAGAACGA GTACCTACGG GAAGAAGTGA CGGGGAGCGG TGCGTTCGGC
GAACTGATCG GTCAAAGCCC GGCTTTGGGG ACAGTCTCTC AGCAGATCGA CCTGGTAGCA
CCGACCGATT CGTCAGTATT GATTCTTGGG GAAAGTGGCA CTGGCAAAGA GTTGGTCGCC
CGCGAGATCC ATCGCCGCAG CAGGCGATCG AATCGTCCGC TCATCAAGGT GAACTGCGCC
GCCGTCCCGC GCGAACTCTA CGAGAGCGAG TTTTTCGGGC ATGCCAAAGG GGCATTCACC
GGAGCCCTGC GCGATCGAGT CGGACGATTT GAACTGGCGG ATGGGGGGAC ACTCTTTCTT
GATGAAGTGG GCGAGATTCC GCTGGAACTC CAAGCCAAAC TGTTGCGTGT GTTGCAAGAG
GGAGAACTGG AGCGAGTTGG CGAAGAACGA ACACGGAAGG TCAACGTGCG GATCATAGCG
GCCACGAATC GCGATTTACG CATGGAGGCG GAGGCGGGGC GGTTTCGGCA AGATCTCTAT
TACCGTTTGA GTGTGTTCCC TGTGGAAGTC CCGCCATTAC GTCGACGCAA AGAGGATGTT
CCCCTCCTGG CCAGTCACTT CCTGAGGATT GCAGCACGCA AGGTGGGACG TCCTCAACCT
TTGTTGACTC TCGCCATCGT CCAGAAACTT CAGCAATACG ACTGGCCGGG AAATGTGCGC
GAGTTGCAGC ATGTCATCGA ACGAGCGGTC ATTACTTCGA CCAACGAGAG ACTCTTGATT
GAACTCCCTC AAACAACGGG CAGCAAACCC ACCAGATCTG TGAAGTCGCC CAGCAATTCC
ACAGCGACAT CTCAGGAGAT TCCCATTCGC ACCGACCTGG AGATCCGGCA GATGGAAGCA
GAAAACATTC TGGCAGCACT GCAGGCCACT CATGGCAAAA TCTCAGGGCC AGGGGGAGCA
GCAGCACTTC TGGGCCTCAA GCCAACCACT CTGGCTTCAC GGATCAAGGC TTTGGGAATC
AAGCCTGCCC CTCGCTATCC GAGAGGAGAA GACTAA
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| Protein sequence | MSDVRSEPLV SDPKRLLLDL AREHSVEGLL NLIVSRLAEQ KRIALARIWL SQPTSECRGC
STQEVCQHQT ECLKLVASRG SSLTTPSITW TAVDGAFQYM PYSVRKVGRI AATGLAIEEP
EIQEPLPEWI ARPEWVRAEG IRGFAGQPLI HRGKVLGVLG VFARQIIGEE CMGWLRMIAD
HAAAAIVTAR AFAEIESLRK RLELENEYLR EEVTGSGAFG ELIGQSPALG TVSQQIDLVA
PTDSSVLILG ESGTGKELVA REIHRRSRRS NRPLIKVNCA AVPRELYESE FFGHAKGAFT
GALRDRVGRF ELADGGTLFL DEVGEIPLEL QAKLLRVLQE GELERVGEER TRKVNVRIIA
ATNRDLRMEA EAGRFRQDLY YRLSVFPVEV PPLRRRKEDV PLLASHFLRI AARKVGRPQP
LLTLAIVQKL QQYDWPGNVR ELQHVIERAV ITSTNERLLI ELPQTTGSKP TRSVKSPSNS
TATSQEIPIR TDLEIRQMEA ENILAALQAT HGKISGPGGA AALLGLKPTT LASRIKALGI
KPAPRYPRGE D
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