Gene Plim_2600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2600 
Symbol 
ID9139311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3372933 
End bp3373580 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content52% 
IMG OID 
ProductRNA polymerase sigma factor, sigma-70 family 
Protein accessionYP_003630623 
Protein GI296122845 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGTCG TCGGCAGGTT TCAGCATTTT GAAACCACAC CCCAGACAAG CGGGTATTTT 
CAAACAGGGA TGCATGGAAT GACTGAAACG TCGGAAATCC AGCTTGTCGA TCGTTGCCTC
GAGGGTGAAC CTGACGCGAC AGTTCTCTTC GTGCGCAAAT TTGAGCGACT CGTCTATTCC
ATTGCAATCC GCATGCTGGG ACATCATCAG GATGCGGAAG ATGTCACCCA GGAATCACTC
ACGCGGGCCA TCAGGCATCT GGGTAACTGG AATCCCGCAC GTCCGCTGAA ACCCTGGCTG
TTAGCGATTG TCGTCAACCG CTGCAAATCC AGACTGAGCT TGAAATCTCG TCCGCAGGGA
TCTTCCCTCG AAGAGCATTC GGCACAGCAC CTCAGTGTCC CGGCAACTCA GACGCAATCG
GCCATCCAGG CAGAGACCGC ACTTCAAATT CAAGTGGCTA TGGAGAGCCT TAAGCCCGAA
TATCGACAGG TCTTTGAATT GTTTTACAAA GAAGAGCGAT CTGTCGATGA AATCTCTCAA
CTCCTGAATG TTCCTGAAGG AACCGTCAAG ACCTGGCTCC ATCGCGGTCG CAAGGCTCTC
GCAACAATTC TCAAAGAGCG ACAACTCATT TCCGAATCCT CAAAATGA
 
Protein sequence
MRVVGRFQHF ETTPQTSGYF QTGMHGMTET SEIQLVDRCL EGEPDATVLF VRKFERLVYS 
IAIRMLGHHQ DAEDVTQESL TRAIRHLGNW NPARPLKPWL LAIVVNRCKS RLSLKSRPQG
SSLEEHSAQH LSVPATQTQS AIQAETALQI QVAMESLKPE YRQVFELFYK EERSVDEISQ
LLNVPEGTVK TWLHRGRKAL ATILKERQLI SESSK