Gene Plim_2600 details

Gene Information

• Locus tag: Plim_2600
• ID: 9139311
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 3372933
• End bp: 3373580
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 52%
• Product: RNA polymerase sigma factor, sigma-70 family
• Protein accession: YP_003630623
• Protein GI: 296122845

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGGGTCG TCGGCAGGTT TCAGCATTTT GAAACCACAC CCCAGACAAG CGGGTATTTT 
CAAACAGGGA TGCATGGAAT GACTGAAACG TCGGAAATCC AGCTTGTCGA TCGTTGCCTC 
GAGGGTGAAC CTGACGCGAC AGTTCTCTTC GTGCGCAAAT TTGAGCGACT CGTCTATTCC 
ATTGCAATCC GCATGCTGGG ACATCATCAG GATGCGGAAG ATGTCACCCA GGAATCACTC 
ACGCGGGCCA TCAGGCATCT GGGTAACTGG AATCCCGCAC GTCCGCTGAA ACCCTGGCTG 
TTAGCGATTG TCGTCAACCG CTGCAAATCC AGACTGAGCT TGAAATCTCG TCCGCAGGGA 
TCTTCCCTCG AAGAGCATTC GGCACAGCAC CTCAGTGTCC CGGCAACTCA GACGCAATCG 
GCCATCCAGG CAGAGACCGC ACTTCAAATT CAAGTGGCTA TGGAGAGCCT TAAGCCCGAA 
TATCGACAGG TCTTTGAATT GTTTTACAAA GAAGAGCGAT CTGTCGATGA AATCTCTCAA 
CTCCTGAATG TTCCTGAAGG AACCGTCAAG ACCTGGCTCC ATCGCGGTCG CAAGGCTCTC 
GCAACAATTC TCAAAGAGCG ACAACTCATT TCCGAATCCT CAAAATGA 

 

Protein sequence

MRVVGRFQHF ETTPQTSGYF QTGMHGMTET SEIQLVDRCL EGEPDATVLF VRKFERLVYS 
IAIRMLGHHQ DAEDVTQESL TRAIRHLGNW NPARPLKPWL LAIVVNRCKS RLSLKSRPQG 
SSLEEHSAQH LSVPATQTQS AIQAETALQI QVAMESLKPE YRQVFELFYK EERSVDEISQ 
LLNVPEGTVK TWLHRGRKAL ATILKERQLI SESSK