Gene Plim_2593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2593 
Symbol 
ID9139304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3365538 
End bp3365999 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content55% 
IMG OID 
Productsugar-phosphate isomerase, RpiB/LacA/LacB family 
Protein accessionYP_003630616 
Protein GI296122838 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAGA TAGCCGTTGC CAGCGATCAT CGCGGCGTGC AAATCAAATC CAAAATCCTC 
GCACTGGTGT CCGATCTCGG ACATCAGGCT CTCGATTTTG GACCGCAGGA TCACGAGAGC
GTCGATTACC CCGACTACGG TGCCCGCGTG GCAAAAGCCG TCTCTCGTGC AGAGGTCGAT
CGTGGCATCC TCATCTGTGG CACAGGCATG GGCATGTGCA TCGTCGCCAA TAAATTCCGT
GGTGTTCGAG CCGCTACTTG CCACGATGAC GTCACTGCCG AACTCAGTCG CCGACACAAT
AACGCTAACG TCATGTGTCT CTCGGGCGAT CTTCTCGGCG AGCCATTTGC CATGAGAATG
GTCGAAATCT GGCTCACCAC TGAATTCGAA GGTGCCAGGC ATGCCCGGCG TGTCGACAAA
ATCTCTCATT ACGAGTCCGA AGAATTTTCA TCGAACTCCT GA
 
Protein sequence
MMKIAVASDH RGVQIKSKIL ALVSDLGHQA LDFGPQDHES VDYPDYGARV AKAVSRAEVD 
RGILICGTGM GMCIVANKFR GVRAATCHDD VTAELSRRHN NANVMCLSGD LLGEPFAMRM
VEIWLTTEFE GARHARRVDK ISHYESEEFS SNS