Gene Plim_2589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2589 
Symbol 
ID9139300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3361280 
End bp3362182 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content50% 
IMG OID 
ProductAlpha/beta hydrolase fold-3 domain protein 
Protein accessionYP_003630613 
Protein GI296122835 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.719605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCACG ACGATCAACG AAAGCCATCA AGGCTAATAA TTAACCAATC ACTAAAACTC 
ACTCGAATTT TAGGCTTCTT GCTGATCCCT TTAATTGCAC CGTTATCTTT ATCCGCACAG
TTCTCCTACC CACCCGAATT CAAAGAGGCT CGAGTCGAGA CCTACCGAAA AACAGGTTCG
ACAGAATTGA AGCTCTGGAT CTTCGGGGAG TCTGATCCTA AAACTACTAA GCCCGCCATT
GTGTTTTTCT TCGGCGGTGG CTGGAATTCC GGATCACCAG CACAATTTGA AAATCAGGCA
CGGCACTTTG CTAAACGAGG CATGATTGCG ATTGTGGCCG ACTACAGGGT CAAATCCAGA
CACAATGTGC AAGTTGTTGA ATGCGTAAAG GACGCCAAGG CTGCTATCGC CTGGGTTCGA
GAAAACGCCA AGCGATTAGG CGTTGATCCT GACAAGATTG CTGCTTCAGG AGGCTCTGCC
GGAGGCCACC TTGCAGCCTC AACCGGCACC ATCAGTGGTT TTGGCAGTGA TGAACGTCCC
AACGCCATGA TTCTCTTCAA TCCTGCCTGC ACTCTCGCAC CCATCGCTGG TTGGCAACCC
CCAGGAGCCA GAGCAAAACT CAGCACTGAA CGATTCGGCG TCGAGGCCAC AGCCATCTCA
CCGGCTCATC ACGTCGGTCC GCAGACTCCA CCAACCTTGA TTCTCCATGG CACGAAAGAC
AGCACAGTTC CCTACGCTTC GGTCGTCGCA TTCGAAGCTG AGATGAAAAA AGCCGGCAGA
CCCTGCAAGT TAGTAGGCTA CGAAGGTGCA GAACATGGCT TCTTCAATCG AGGTGAAAAC
TATGACAAGA CTCTCACTGA AGCTGACAAA TTTCTGGTAG ACCTCGGCTG GATCAAAAAA
TGA
 
Protein sequence
MIHDDQRKPS RLIINQSLKL TRILGFLLIP LIAPLSLSAQ FSYPPEFKEA RVETYRKTGS 
TELKLWIFGE SDPKTTKPAI VFFFGGGWNS GSPAQFENQA RHFAKRGMIA IVADYRVKSR
HNVQVVECVK DAKAAIAWVR ENAKRLGVDP DKIAASGGSA GGHLAASTGT ISGFGSDERP
NAMILFNPAC TLAPIAGWQP PGARAKLSTE RFGVEATAIS PAHHVGPQTP PTLILHGTKD
STVPYASVVA FEAEMKKAGR PCKLVGYEGA EHGFFNRGEN YDKTLTEADK FLVDLGWIKK