Gene Plim_2583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2583 
Symbol 
ID9139294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3354370 
End bp3355233 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content54% 
IMG OID 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_003630607 
Protein GI296122829 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.756929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGTGA TTATTGGATT CATCGTTGTA ACTGGCTGCG TGCTGGGCGG CTACACATGG 
GCTGGTGGCC ATGTGGAAGC TTTGATCCAC CCCTCCGAAG TGCTCACCAT TGGTGGTGCT
TCGCTCGGGG CCATGCTGGT CATGGGCAGC CCCAAAATCC TCAAAGATCT GATCAAGTCG
ATCATCGGGG CACTTAAGGG GAGCCCGTTT AATAAGAAAG CGTACGGTGA TCTTTTCAAG
CTGTCTTATG ATCTCCTCAA GACGGCTCGA AAAGATGGCT TACTCGCACT AGAGCCTCAC
CTGAACGATC CTCACGAAAG CAAGATTTTT TCGAAGTATC CCCGGCTCCA GAAGGATCAT
CATTTTACGA CCTTTCTGTG TGATGGACTG TCTTCAGTCG TGGAGGCCAG CATGAGCCAG
GAACAGCTCC ACGACCTGCT CCAGAAGCAG ATTGCTGTGA TGGAAGAAGA GCATCATCAG
GCCGTTGGAA TTCTCGCCAA GAGTGCCGAC GCGATGCCCG GCTTCGGGAT TGTGGCTGCC
GTGCTTGGAA TTGTGATCAC CATGGGTGCC ATTGATGGCC CTGTGGAGGA AATTGGTCAC
AAAGTGGGTG CGGCTCTCGT CGGTACCTTC CTCGGGATTC TCGCCTCGTA TGGCTTTATG
GCTCCACTGG CAGCACGCAT GGATCTTCTC GGGAAATCTG AGATGGATTT CTATCGCACA
ACAGCGGCGA TCATCGAAGC CGCCATTGGT GGTGCTGCAC CTAAGCAGAT TATCGAACAG
GCCCGTCGAG TCGTCTGCAG TGAAGCCCGC CCCGAGCGTG TCGAACTGGA AAAAATGCTC
AAAGAAGCCG ATGCAGCAGC GTGA
 
Protein sequence
MFVIIGFIVV TGCVLGGYTW AGGHVEALIH PSEVLTIGGA SLGAMLVMGS PKILKDLIKS 
IIGALKGSPF NKKAYGDLFK LSYDLLKTAR KDGLLALEPH LNDPHESKIF SKYPRLQKDH
HFTTFLCDGL SSVVEASMSQ EQLHDLLQKQ IAVMEEEHHQ AVGILAKSAD AMPGFGIVAA
VLGIVITMGA IDGPVEEIGH KVGAALVGTF LGILASYGFM APLAARMDLL GKSEMDFYRT
TAAIIEAAIG GAAPKQIIEQ ARRVVCSEAR PERVELEKML KEADAAA