Gene Plim_2575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2575 
Symbol 
ID9139286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3346537 
End bp3347379 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content53% 
IMG OID 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_003630599 
Protein GI296122821 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATC TTCTTTACAC ACTATGCCAC AATCGCCAGT CAGCATCTGG ATGTCATTGG 
ATGTCTGGTC GAACCTGCTG GTTGATGCTT TTGGGAGCCA GTGCCGTTTT GTGGCATGCC
GTGGCGTACC TTCAAGTGGA CGTGATGGCT GCTCCACCAA CGGTCATCGA CAACCCGGCC
ACAACCACTG CGGCACCGCC ACAGACCGCC GCGGTTCCAC AGGCAGAGCG ATGGAACAAG
GAACTCGCTG CTTTCGACAA GGAGAACACG ATGCATCCTC AGCGCACGGG CGGCCTTGTT
TTCTGCGGCA GCTCTACCAT TCGTTTATGG AAACTCAAAG ATTCATTCCC TGAATACACT
CCGATCAATC GCGGGTTTGG AGGCTCCCGA TATGACGATC TTGTCCGGCA TGCCGAACGC
ATTCTGAAGC CACTCCAACC GGCTGTGCTG GTGATCTATT CGGGCGATAA TGACATTGCC
GCCAAGCAGT CCAGTGGAGA AGTCGTGCAG AACTTCGAGA AGTTTCATAC CTGGGTTCGT
ACCGCATTAC CCGAGACGAA AATCATCGTC TTGGGCATCA AACCCAGTGT TAAACGCTGG
GAAATGATTG AATCCATTCG CGAAACCAAT AGTCAACTGG CGAAAATCTG CGGCAAAGAC
CCCCAGGCCA CCTTTATCGA TACCGAAACG GTCATGCTGG GGGCGGATGG TAAACCCAAC
CCTGAACTGT TTGTAGCCGA TGGGCTGCAT ATGAGCGAAG AGGGCTATCG CCGCTGGTCG
CAATTGCTGA AACCTTATCT CGCGGTCATT CATCCTCCCC AATCAAGTGC GATTACCGAG
TGA
 
Protein sequence
MKDLLYTLCH NRQSASGCHW MSGRTCWLML LGASAVLWHA VAYLQVDVMA APPTVIDNPA 
TTTAAPPQTA AVPQAERWNK ELAAFDKENT MHPQRTGGLV FCGSSTIRLW KLKDSFPEYT
PINRGFGGSR YDDLVRHAER ILKPLQPAVL VIYSGDNDIA AKQSSGEVVQ NFEKFHTWVR
TALPETKIIV LGIKPSVKRW EMIESIRETN SQLAKICGKD PQATFIDTET VMLGADGKPN
PELFVADGLH MSEEGYRRWS QLLKPYLAVI HPPQSSAITE