| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2561 |
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| Symbol | |
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| ID | 9139272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 3331224 |
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| End bp | 3332867 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003630585 |
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| Protein GI | 296122807 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACAT TTCAGCAAGA GTCGGGCCAG TTCGTTTCCA TCCACTCTTT GAAACATTCG
GTTCCCGCCA TACGGTTGGC AGGCCGCCGC TGGCTGGCCG GCTGGTCTCC CCGGGTTGTT
GTACTGGCAT TCGCCTGCCT GGCTGATGCC GGCGTGACAG ATGCCTTACT GGGAATTGAA
AACCCAAACT CCCGTTCGAT GGCACAAGCC CAATTGTTTC GCCCATCGAC AAGGCCACCA
GGTTCTTCGA CAAATCCACC CACTCCTCCT GGAACACCGG GTGCCAATGT GATGACTGCT
CCAGCAGATC CGATGCAGGC TGAAACCGAG GCGGCCTATC AGCGCGGTGA TTTCCCCAAG
GCTCTCCAAC TGGCAGAAGC CATGCTCGCC CGTAATCCGA ACAACGATAT TGCGATTTAC
CTGAGAGGTT CGGCCCGCGT GGAACTCGGC ATCCAGCAGC AGGATCTTGA ACTCATTCGC
AGTGGCATCG AAGACGCCCG CTCAGCACTC AAAGTCGGCG GCACAGATAA GATCAATTAT
TACCTCCCTT ATCTCTACGG CATGACAGCA TTAGCGGGCT TGGAAGAAAA ACGGGAGCAT
GCCGAAGTCG TTATCAAGTT TGCCGACAGT ATTCTGGCCC GGCCCAATTT ACGCCCCGAA
GAGCGGGCGA ATCTGCAATA TCAGAAAGCC GGCGCTCAGG TTTACCTCAA GAATACCGAG
CAGGCGATTG CTTCTTATCT GGCGGCCATT CAATCCAGCC CACAACATCT GGGCGCACAT
GTCGCTCTGG CCAGTGCTTA TGCAACGGCT GGAAAAATTG CAGAGGCGGA AGCCGCCTTC
TCGAATACAA CACGCGTCTT CCCTAACAAC CCGCTCGTAT TTAACAACCG TGGCATGTAT
TACCAGCAGC AGCGAAAGCC TAAAGAGGCC ATTGCCGATT TCTCACGGGC AATCCAACTC
GACCCTCGCT TTTATGTCGC TTATACGAAC CGTGGTTTTA CCTATCTGAA CGATGGTGAA
AACCCGGCAG CAGCCATCGC TGATTTTACA GAATCGCTCA GACTCAACCC TCAGCAGCCC
GGGATCTATA GCTTGCGAGG GGCCGCAAAA TTGCAGCAGG GCAAACTCAA CGAAGCACTG
GCTGACTATA ACGAGACATT GCGACTGGAT CCTAAAAATC CAATTGCAAT GGCAGACATC
GGCTTCACCA AGTTCTTCAG CAAGGATTAC CCAGCCGCAC TGGCTTCGTT TAATAATGCC
GTACTGGAAG ATCCCAACCT TCGCTATCTG AATCCCTGGC GATACCTTTC CATGGCCTAC
GCAGGACAGG AAGGTGCTGC AGCAGCCACT TTCTCAGACA GTCTCTCGAA ACCTGTCGAC
AAGCGAGACT GGATGGATCA ACTGGTGCTC TTCCTGGCAG GTAAGATCAG CGAGCAGGAA
CTCTTCAATG CGGCTGAGCC GAACGACCTG AACCTGAGAA ATGCCCAGTT CTGCGAGGCC
TATTACTTTA TTGGTCAGCA GCGATTGCGC GCAGGTAATA CAGCGGGTGC CAACCAGTTC
TTTGAGCAGG CCCTGGCAAC CAAGGCCAGA TATCTTTCTG CCTATCGAGG TGCTGGCTTC
GCTCTGGGCA AGTTCGCTCA GTAG
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| Protein sequence | MTTFQQESGQ FVSIHSLKHS VPAIRLAGRR WLAGWSPRVV VLAFACLADA GVTDALLGIE
NPNSRSMAQA QLFRPSTRPP GSSTNPPTPP GTPGANVMTA PADPMQAETE AAYQRGDFPK
ALQLAEAMLA RNPNNDIAIY LRGSARVELG IQQQDLELIR SGIEDARSAL KVGGTDKINY
YLPYLYGMTA LAGLEEKREH AEVVIKFADS ILARPNLRPE ERANLQYQKA GAQVYLKNTE
QAIASYLAAI QSSPQHLGAH VALASAYATA GKIAEAEAAF SNTTRVFPNN PLVFNNRGMY
YQQQRKPKEA IADFSRAIQL DPRFYVAYTN RGFTYLNDGE NPAAAIADFT ESLRLNPQQP
GIYSLRGAAK LQQGKLNEAL ADYNETLRLD PKNPIAMADI GFTKFFSKDY PAALASFNNA
VLEDPNLRYL NPWRYLSMAY AGQEGAAAAT FSDSLSKPVD KRDWMDQLVL FLAGKISEQE
LFNAAEPNDL NLRNAQFCEA YYFIGQQRLR AGNTAGANQF FEQALATKAR YLSAYRGAGF
ALGKFAQ
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