Gene Plim_2554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2554 
Symbol 
ID9139265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp3319837 
End bp3320583 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content55% 
IMG OID 
Productprotein of unknown function DUF28 
Protein accessionYP_003630578 
Protein GI296122800 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.113083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGCC ATTCCCATTG GGCGAATATC GCTCACAAGA AGGGACGATA CGATCAAAAG 
CGAGGGAAGC TCTTTGGCAA GCTTTCCAAG GCTATTATTG TGGCTGCACA GCGGGGGGGG 
GATCCGGCTG CGAATCTCGC GCTGCGCTAT GCAATTGATC GCGCCAAAAA GTCGAGTATG 
CCTGCGGATA CGATCGAACG GGCGATCAAA AAAGGGACAG GCGAGCTTCA GGCCGACAAT 
TACGAGCAGG TACTCTATGA AGGTTATGGC CCCGGTGGTG TGGCTGTCCT CTGTGACATT 
CTGACAGAGA ACCGGAATCG TACAGCAGGT GAAGTCCGCC GGATTTTTGA TATCCATGGC 
GGGAATCTTG GCAGCACAGG TTGTGTGGCC TGGATGTTTG ATCGCCGAGG GCTCTATGCG 
GTGAAGGCAG GCGTGACCGA TGAAGACACG CTGATGGAGA TTGCGCTCGA TGCCGGGGCA 
CTGGATGTCA CCGCCGACGC TGGTGGTTTT TCTGTGATTT GTCCCCCGGA GACGTTTACT 
CCTGTGGGGG AAGCCCTGGA GAAAGCCGGA ATACCGATGG AATCTGCAGA AATCACCATG 
CTGCCGCAGA ACACGGTCGA GCTTGATCTG GAGATGGGGC GAGCCGTCCT GGCTTTAATT 
GATGCTCTCG AAGACAACGA TGACATTCAG AATGTGATGT CGAATTTCAG CGTGTCGGAA 
GAAGTGTTGG CAGAGCTTTC GAAGTGA
 
Protein sequence
MAGHSHWANI AHKKGRYDQK RGKLFGKLSK AIIVAAQRGG DPAANLALRY AIDRAKKSSM 
PADTIERAIK KGTGELQADN YEQVLYEGYG PGGVAVLCDI LTENRNRTAG EVRRIFDIHG 
GNLGSTGCVA WMFDRRGLYA VKAGVTDEDT LMEIALDAGA LDVTADAGGF SVICPPETFT 
PVGEALEKAG IPMESAEITM LPQNTVELDL EMGRAVLALI DALEDNDDIQ NVMSNFSVSE 
EVLAELSK