Gene Plim_2553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2553 
Symbol 
ID9139264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3318647 
End bp3319705 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content56% 
IMG OID 
ProductrecA protein 
Protein accessionYP_003630577 
Protein GI296122799 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.159054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCCGA AGGCCAAGCC AGACAAGAAA TCTGCTGCAG AAGTTGAACG CGAGCATGTG 
AAGTTGCTCG ATAACACACT GGGGCAGATC GAAAAGGCCT TTGGTCGCGG CTCGATCATG
AAGTTGACCG ATGCCGGCAT GGATGTTGAC GGGATTGGTT CCGGGGCGTT GTCGCTGGAT
TTGGCACTGG GTGGTAAAGG CTTTCCACGG GGCCGGATCG TTGAGATCTT CGGGCCCGAA
TCAAGCGGTA AAACCACGCT GGCCCTGCAT TGCATTGCGA ATTCACAGCG TGAGGGAGGG
ATTGCGGCCT TTATCGATGC TGAACATGCA CTGGATCCTG CCTGGGCGAA AAAGCTGGGA
GTGAATCTGG AAGAGTTACT GGTCAGCCAG CCTTCGACGG GAGAAGAAGC TCTGCAGATT
GCCGAGATGC TGATCAAATC GAACGCTGTT GACGTCGTGG TGATTGACTC GGTCGCGGCG
CTGGTTCCTA AAGCGGAACT GGAGGGCGAG ATTGGCGATT CGCATGTGGG GCTGCAGGCC
CGCATGATGA GCCAGGCCAT GCGTAAGCTG ACCGGGGTGA TCTCCAAAGC TAAAACCGTA
GTGATCTTTA TCAATCAGAT TCGTGAGAAG ATCGGCGTGA TGTTCGGCAG CCCGGAAACA
ACTCCTGGCG GGCGGGCTCT CAAGTTCTAT TGCTCCGTCC GGGCTGATGT CCGGAGGCTG
GCAACTTTGA AAGAGGGGGA TGTCACGACC GGGATGCGCA TGAAGGTCAA GATTGTCAAA
AACAAAGTCG CACCCCCATT CCGTGTGGCT GAGTTTGACA TGCTGAGTTC ACAGGGAATC
AGCTTTTCTG GCGATCTTCT TGATCTGGGG GTCGCTGCGC GGCTCGTTGA GCGAAGTGGT
AGCTGGTTTA CTTATGGCGA AGTCAAGCTC GGTCAGGGCC GGGATAAAGC CCGGATCTAT
CTGGAAGAGC ATCCGGAGTT GATGGCCGAG ATCAAGGCCA AGGTGCTGGA ACTGCATGCC
GCTGGTCAAC ACATTTCCAC CTCTTCCAAG GGAGAGTGA
 
Protein sequence
MSPKAKPDKK SAAEVEREHV KLLDNTLGQI EKAFGRGSIM KLTDAGMDVD GIGSGALSLD 
LALGGKGFPR GRIVEIFGPE SSGKTTLALH CIANSQREGG IAAFIDAEHA LDPAWAKKLG
VNLEELLVSQ PSTGEEALQI AEMLIKSNAV DVVVIDSVAA LVPKAELEGE IGDSHVGLQA
RMMSQAMRKL TGVISKAKTV VIFINQIREK IGVMFGSPET TPGGRALKFY CSVRADVRRL
ATLKEGDVTT GMRMKVKIVK NKVAPPFRVA EFDMLSSQGI SFSGDLLDLG VAARLVERSG
SWFTYGEVKL GQGRDKARIY LEEHPELMAE IKAKVLELHA AGQHISTSSK GE