Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2551 |
Symbol | |
ID | 9139262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 3314240 |
End bp | 3316852 |
Gene Length | 2613 bp |
Protein Length | 870 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | alanyl-tRNA synthetase |
Protein accession | YP_003630575 |
Protein GI | 296122797 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.549069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGACAG ATGAACTCCG CGAAAAGTAT CTTGATTTCT TCGTCGGGAA GGGTTGTCTC CGTCGCCCTT CGGATGTGTT GGTTCCAAAA GATGATCCAA CCGTTCTTTT CACACCTGCG GGGATGAATC AGTTCAAGAA TCAGTTTCTT GGAATCGGGC CTCTCGATTT CACCAAGGCC ACAACCTGCC AGAAGTGCCT GCGCACGGGT GATATCAGCA ATGTCGGGGT GACGTCGTAT CACCACACCT TCTTTGAAAT GCTGGGGAAT TTTTCGTTTG GAGATTACTT CAAGCGAGAA GCCATCCACT GGGCGTGGGA ATTCCTGACG GACAAGAAGT GGCTGGGCCT GGAACCCTCG CGACTGACTG TCACCGCTTA TCTGGACGAC GATGAGGCGG TCGGTATCTG GCAGAACGAA ATTGGCCTCG ACTCGAAGCA GATTACCCGC GAAGACGAAT ATGAAAACTT CTGGCCTGCC GGTTCACCCA CCAATGGCCC GGATGGTGTC TGCGGCCCTT GCAGTGAAAT TTACTACACG CCACCCAGCG GCAAGAAAGT CGAAATCTGG AATCTCGTCT TCACGCAGTT CAATCGCGTG GGGGATCCTC CGAACAATTT GAGGCCATTA CCTAAAAAGA ATATCGACAC CGGGATGGGC CTGGAGCGGA CTGCAGCGGT CATGCAGGGC TTCGAGAGCA ACTACGAGAT CGATATTCTC CGGCCATTGT GTGACCGCGG CGGTGAGATC CTGGGGGTCA AGTATGACTT TGCCAGCCCT GTGGGCCGAC CACTTCGCCG CATTGCCGAT CATGTCCGTG CCTGTACGTT CGCCATCCAT GAGGGCTGTG TCCCTGGCCC GGAGAAAGAA AACTACATCA TTCGACTGCT TCTGCGGCGG GCTTCGATGG AAGGCTTCCT GTTAGGAAAA CGAGAGCCAT TCCTTTCGCA ACTGGTGCCC ATGATTGCTG AAGTCATGCG GAAGCCTTAT CCCGAACTGC ACCAGACGAT TGAAGCCGTC TCGCATGTGA TCGAGTCAGA AGAAAAGCAG TTTCTTGGTG TGGTGGAGCG TGGCCTGACC AAGTTCCGCA AGCTGGTCGA TCAGGCCAGA AGTGCGAATC GAACTTCACT TTCTGGTGAC GAAGCGTTTG ATCTGCATCA GACTGACGGC TTCCTGATTG AGCTGACTGA GACGTTAGCC GCTCAAGAGG GTGTATCAGT CGATATGGCC CGCTTCAAAG AGTGCCGGGA AGAGGCCAAA AAGGCGAGCG GACGCGGAGC GTTTGCAGAT TCTGTGATGT CGGAAGGGCC GATTGATGCC CTCAAAAAGA GTGGCGGGAC AGAGTTCCTG GGCTATGAGG CCATCGAATC CAAGGCCACA ATTCGCGGCA TTATTGCAGA TAAGAAACTG GCCGAAAGCT ATTCCAGCCC ACTGGTCACC ATTGGGATCG TTCTCGACAA GACACCGTTC TATGGTGAAT CGGGTGGTCA GGTCGGTGAT ACCGGTACTA TTCGCACTGC CAGCGGTGAA TTCACCGTTT ACGATACTCA GAAGGATGGC GAACTCTTTG TCCACATTGG GCAACTCAAA GCGGGTTCGC TGAAGGTGGG AGAAGAAGTC ACCGCCGGTG TCGATGCCCA CCGTCGAGCC GCTATCCGCC GTGCTCACTC GGCCACACAC ATTCTGCATC ATGCTTTGCG AACGACTTTG GGGGAAAACG CGACTCAGCG TGGTTCGAAG GTCGAAGGGG ATCAGCTGCG TTTCGACTTT GCTCATCCGC GCAGCCTGAC GAATGAAGAA TTGATCTCGA TTGAAGATCA GATCAACCAG TTGATTGCGG AAGGGGCTCC AATCAACACG CGCGTGATGC CCATTAATGA GGCCAAAAAA CTGGGAGCGA TGGCCCTCTT TGGTGAGAAG TATCCCGATT TTGTCCGCGT GGTTGAAATG GGAGATTTCA GTCGCGAATT CTGCGGCGGT ACACATCTTT CGAACACCGG GCAGGTTGGT ATCTGCCGCG TGGTGAAGGA TGAACTGGTT GCTGCCGGTG TGCGCCGCAT CAGTTGCGTC ACAGGCCCTA AGGCGATTGC CCGTATGCGG GAATCCGAAA ATCTCCTGCG GGAAGTGGGA ATGCTGGTGA AAGCCACGAC TGCTGAAGAG TTGCCACGCA AGGTCGCAGC GCTGCAGGAT GAACTGCGCG TGGCGAAGAA GGAACTCTCT CAGTACGCCT CGCAATCACT CGCTGGTATG GCTGCCAAAC TGGTGAATGA TGCGCCGATG GTGGGCGACA TCAAGGTGAT TGTCCACCGT GCTGATGAGC TGGCCCGCGA GCAGCTCAAA GAACTGGTCG ATCAGATTCG TGCTCAAGCG GGATCGGCAG CGGTTCTTGT GGGACAGGCG GTCGATGGTA AGGTTTCGTT GATTGCCGGC GCAACCAAAG ACCTGGCCCA GCGGTTCAGT GCCAGCGATG CCGTCAAGGC GGCTGCCAAA CTGGTTGGCG GCGGTGGAGG TGGTCGAGCC GAACTGGCCG AGGCCGGTGG CAAGATCCCG GAAAAACTCG ATGAAGCTTT GCAGGAAGGT CTGGCATTCC TGAAGAATAA ACTCGGCGGT TAG
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Protein sequence | MKTDELREKY LDFFVGKGCL RRPSDVLVPK DDPTVLFTPA GMNQFKNQFL GIGPLDFTKA TTCQKCLRTG DISNVGVTSY HHTFFEMLGN FSFGDYFKRE AIHWAWEFLT DKKWLGLEPS RLTVTAYLDD DEAVGIWQNE IGLDSKQITR EDEYENFWPA GSPTNGPDGV CGPCSEIYYT PPSGKKVEIW NLVFTQFNRV GDPPNNLRPL PKKNIDTGMG LERTAAVMQG FESNYEIDIL RPLCDRGGEI LGVKYDFASP VGRPLRRIAD HVRACTFAIH EGCVPGPEKE NYIIRLLLRR ASMEGFLLGK REPFLSQLVP MIAEVMRKPY PELHQTIEAV SHVIESEEKQ FLGVVERGLT KFRKLVDQAR SANRTSLSGD EAFDLHQTDG FLIELTETLA AQEGVSVDMA RFKECREEAK KASGRGAFAD SVMSEGPIDA LKKSGGTEFL GYEAIESKAT IRGIIADKKL AESYSSPLVT IGIVLDKTPF YGESGGQVGD TGTIRTASGE FTVYDTQKDG ELFVHIGQLK AGSLKVGEEV TAGVDAHRRA AIRRAHSATH ILHHALRTTL GENATQRGSK VEGDQLRFDF AHPRSLTNEE LISIEDQINQ LIAEGAPINT RVMPINEAKK LGAMALFGEK YPDFVRVVEM GDFSREFCGG THLSNTGQVG ICRVVKDELV AAGVRRISCV TGPKAIARMR ESENLLREVG MLVKATTAEE LPRKVAALQD ELRVAKKELS QYASQSLAGM AAKLVNDAPM VGDIKVIVHR ADELAREQLK ELVDQIRAQA GSAAVLVGQA VDGKVSLIAG ATKDLAQRFS ASDAVKAAAK LVGGGGGGRA ELAEAGGKIP EKLDEALQEG LAFLKNKLGG
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