Gene Plim_2531 details

Gene Information

• Locus tag: Plim_2531
• ID: 9139242
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 3291017
• End bp: 3291580
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 55%
• Product: transposase
• Protein accession: YP_003630555
• Protein GI: 296122777

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.719011
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCAGAA TTACCATGAG CGATTATCGC CGGAACTACC ACGGCCGAAC GTTCTTCTTC 
ACGGTCGTAA CAGAACGCCG CCGTCCGATT TTGACGACCG ATACCGCCCG TCACCATTTG 
CGTCAGGCGA TACGCACTGT TCGCAGAAAG CATCCCTTTG AGATTGTTGC GTTCGTGCAG 
TTGCCCGACC ACCTGCACAC TGTCTGGACA TTGCCCCGCA ATGATGTTGA CTATTCCCGC 
CGCTGGAGGT TGATCAAAAT GTATTTCACC AAGGCGTGGC TTCAAGAAGG GAATGCCGAT 
GTCACGCCCA GCACCAGCCG CCAGTCGAGA GGTGAGCAGG CGATCTGGCA ACGACGCTTT 
TACGAACACA CTTGTCGCGA CGAGGAGGAT TCGAAACGCT GCATCGATTA CATCCACGCC 
AATCCGCTGA AGCACGGCTT GGTGAACCGC GTTGCCGATT GGCCTTGGAG CTCATTTCAT 
CGGTTCGTGC AAGCTGGTGA ATATACCCTG GAGTGGGGCC GCACGAGTCG ATGGGACGAC 
GACGAATTCA GTGATTTTGA GTGA 

 

Protein sequence

MIRITMSDYR RNYHGRTFFF TVVTERRRPI LTTDTARHHL RQAIRTVRRK HPFEIVAFVQ 
LPDHLHTVWT LPRNDVDYSR RWRLIKMYFT KAWLQEGNAD VTPSTSRQSR GEQAIWQRRF 
YEHTCRDEED SKRCIDYIHA NPLKHGLVNR VADWPWSSFH RFVQAGEYTL EWGRTSRWDD 
DEFSDFE