Gene Plim_2530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2530 
Symbol 
ID9139241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3289634 
End bp3290845 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content51% 
IMG OID 
ProductAnkyrin 
Protein accessionYP_003630554 
Protein GI296122776 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.431821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAAAT TGCCCTACAA TGAATTGACT ATGGATGACA ACTCACTGAC CAACTTGCTG 
AAGACCATCT ATTACGGAAC CATCACAGAG TTTCGTCAAA AACTGACACC AGAGACCTCT
GTTAACACCG CTGATAGTGA CGGTAATACA CTCCTGATGC ATGCCGTACG GAGTGAGGAT
GCAGAGAAGG TCCAGCACTT GCTGGAACGT GGAGCAGATT TCACTGGCAT CAATCGCTTC
AGCCAGACGG CTCTCGACGT GGCTGTGGAA CAGAATTTCT TACCCGGCAT CGACCTCCTC
TTAAAAGCCG AAGCGACTCA GAATGCCCTC CCGCAGTCTT CGCTGAAAAT GCATTCCGAA
CAAACGCCTC CTGGAAGATT GCCAGTCATC TCCAATGCCT GGAGCATCGA AGCGGTCAGG
CGACTAGTCG ATGCGGGACA TGACCTGAAT CAGGCGGATG AAGAATTCAA GCGCGAATAT
CTCGGCTTAA GACCTGATGC CACATTCGAG TTAAAACTCA CGCCGGAAGA GTTTCAAGCA
CAAATGGCGC CGCGTGATGG CTTGACCAAC CCTGAGTTGA TGGAAGTCCC CTTCTGGCGG
GAGATGGTGC GTACGGGAGA GAATGCCTAT ATGGGGTATC GACATTACGC GGGCGAAGCC
GAACCAGACT ATTCGCGAAA AGTCTGGACC TACGATCGTC ACGGTGCCCC GATTGTTTCA
CTCCCTGACG GCCGCTTTGT CCGTATCGCA GGTGAACACG AAGACTATTA CGACTCCGAC
TTTTATATTT TCAATGACAT CACGGTCTTT GATGGCAAAG GGGGATTCCA GATCTGGGGA
TATCCCCGCG AAACTTTCCC GCCGACAGAT TTCGCTTCTG CCACACTGGT TGACAATCAC
ATCTATATCA TTGGCTGTAT AGGTTACCGG GAGCAGCGAA ACGGATCGGT CACACCAGTC
TACCGCCTGA CACTGGATTC CTGGGAAATC GAACGTGTGG AAACAACAGG CGAGAATCCT
GGCTGGATCT GGGAACACAC TGCAAAACTC AACGCCTCTC AGGATGCAAT CCTGATTCAA
GGCGGTCAAT ACATCGAAGT CACCCCTCAC GGTGGATACG AATACAACCT CAATCCACAC
CGCCACCAAC TCGACCTGAA AACAAGATGT TGGACAAAAC TCAATCAACA GGATTCTGCC
AATCTCGTGT AG
 
Protein sequence
MGKLPYNELT MDDNSLTNLL KTIYYGTITE FRQKLTPETS VNTADSDGNT LLMHAVRSED 
AEKVQHLLER GADFTGINRF SQTALDVAVE QNFLPGIDLL LKAEATQNAL PQSSLKMHSE
QTPPGRLPVI SNAWSIEAVR RLVDAGHDLN QADEEFKREY LGLRPDATFE LKLTPEEFQA
QMAPRDGLTN PELMEVPFWR EMVRTGENAY MGYRHYAGEA EPDYSRKVWT YDRHGAPIVS
LPDGRFVRIA GEHEDYYDSD FYIFNDITVF DGKGGFQIWG YPRETFPPTD FASATLVDNH
IYIIGCIGYR EQRNGSVTPV YRLTLDSWEI ERVETTGENP GWIWEHTAKL NASQDAILIQ
GGQYIEVTPH GGYEYNLNPH RHQLDLKTRC WTKLNQQDSA NLV