Gene Plim_2522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2522 
Symbol 
ID9139233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3281839 
End bp3282858 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content54% 
IMG OID 
Productglycosyltransferase 
Protein accessionYP_003630547 
Protein GI296122769 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATGTCG CACTTCTAGG CCAGTGGCGG GACCGACCAT CCTTTCGATT TCGCGCATTG 
CAGTATCTCC CCTACCTCGA AACTGTGGGC CATGCGGCAA CCATTATCGA ATTCTCACCT
CATCTGTGGG GTCGCCTTCG CCAATACTCA CAACTGGCAA AGTTTGATTC AGTCTTCATC
CAACAGCGAT TACTCCACCC TTTCGAACTT GCCTGGCTCA AGCGGAATAC CAGACATCTC
GTCTTCGATG TCGATGATGC GATTATGCGC AAAAGCGATG GCAGCCCCGA TTCCCGCCGC
ATGTCGAGAT TCCGCGCCAT GTGTCGCTCG GCGAATCTCG TCATCTGTGG CAACCAGTTC
CTGGCTGATG AAACCCGCGT GCATACATCA AAGCTGGAAA TCATACCTAC GACTATCGAG
TTAAATCGCT ATCCATCTTT ATCTAGTAAA TATGAATCAC TAGTAAATAT TCCGAATCCA
CTATTAACCA TCGGCTGGAC AGGTTCGCGG GCCACATGCC GCTACCTGAA TGAGGTATTC
CCTGTCATTG CCGAATTTCC AGGTCAGGTG CAGGTGAAAC TCATTGCTGA TGATCTCTCG
AACTGCGATC TGAAACTTCT CCAGGACGTG CCTTACGAAT TCATTCGCTG GTCACCCGAA
ACCGAAATTG CCGCTGCCAC GACTTTTGAC ATGGGGATCA TGCCTCTCCC GGATCAGGAG
TTCACTCGCG GCAAATGCGG CTGCAAAGCC CTGCAATATA TGGCCCTGGG CATCCCTGCC
ATTTGCAGTC CCGTCGGGAT GAATGTCGAT CTCATCGAAC CAGGCAAAAC GGGTTTTCTC
GCTCGCACGG CTGGCGAATG GCGCGAGGCC TTCCAGCAAT TGATCGCCAG CCCGAAACTG
CGTGCCCAAG TCGGCATCGC GGGGTATCGC GTGGTGAGTG AACAATTCGC TGCCTCAACC
TGGGCCCCCG CCTGGTTGAA CGCCGTCTTC CCGACCACTC AATCCTCCAC CCCCTCCTGA
 
Protein sequence
MNVALLGQWR DRPSFRFRAL QYLPYLETVG HAATIIEFSP HLWGRLRQYS QLAKFDSVFI 
QQRLLHPFEL AWLKRNTRHL VFDVDDAIMR KSDGSPDSRR MSRFRAMCRS ANLVICGNQF
LADETRVHTS KLEIIPTTIE LNRYPSLSSK YESLVNIPNP LLTIGWTGSR ATCRYLNEVF
PVIAEFPGQV QVKLIADDLS NCDLKLLQDV PYEFIRWSPE TEIAAATTFD MGIMPLPDQE
FTRGKCGCKA LQYMALGIPA ICSPVGMNVD LIEPGKTGFL ARTAGEWREA FQQLIASPKL
RAQVGIAGYR VVSEQFAAST WAPAWLNAVF PTTQSSTPS