Gene Plim_2517 details

Gene Information

• Locus tag: Plim_2517
• ID: 9139228
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 3276698
• End bp: 3277465
• Gene Length: 768 bp
• Protein Length: 255 aa
• Translation table: 11
• GC content: 54%
• Product: ABC transporter related protein
• Protein accession: YP_003630542
• Protein GI: 296122764

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGATC CTGTTGTCGA CGAATCTTGC GAGACAATCT TGCTCAGTTC AGCCATGCCA 
CCTCATGCAC AGCTTGTCGC CACGGGGATC GATAAGGCTT ACCGCAAGGG AGATCATCAG 
GTTCCTGTAC TTCGCGGAGT CGATATCTCG ATTGATCGCG GAGAGTTTCT ATCGATCGTG 
GGCCAATCGG GCTCAGGGAA AAGCACGCTA CTGCATTTGA TGGGGTTACT GGATGCCCCT 
GATCTGGGTG AAGTGCTGCT TGATGGACAG CGGATTGATG ATCTGCCAGC CCGCACCCGT 
GATCAGATTC GTAATCGCGT CTTTGGCTTC GTGTTTCAGT TCTATCATCT GATGCCTGAA 
CTGACGCTGG TGGAGAATGT GGTTCTGCCA CTGATGATCC GCCATTCGAT CTGGTCGTAT 
TGGAAGAACC GTCGATCGCA TATTGACCGG GCCAAACAAT TGATCGACCG CGTGGGGTTA 
TCGCATCGAT TGACGCATAA GCCTTCGGAG CTTTCCGGTG GTGAAATGCA GCGGGCAGCC 
ATTGCCCGGG CACTCGTTTC GCAACCTCAG ATACTGCTTG CCGATGAGCC GACGGGCAAC 
CTGGATGAAA AGACTGGTCG CGAAATTATG GATCTGCTCA AACGGCTCAA TACCGAAGAG 
CAGCTTTCGA TTGTGATGGT GACCCACGAT GCCCAGTTAG CGCGAGAAGC GACCCGAACT 
GTGCGGCTGA CTGCAGGTCG TGTAGAAGCA CTGGCTGGAG CTGCCTGA 

 

Protein sequence

MSDPVVDESC ETILLSSAMP PHAQLVATGI DKAYRKGDHQ VPVLRGVDIS IDRGEFLSIV 
GQSGSGKSTL LHLMGLLDAP DLGEVLLDGQ RIDDLPARTR DQIRNRVFGF VFQFYHLMPE 
LTLVENVVLP LMIRHSIWSY WKNRRSHIDR AKQLIDRVGL SHRLTHKPSE LSGGEMQRAA 
IARALVSQPQ ILLADEPTGN LDEKTGREIM DLLKRLNTEE QLSIVMVTHD AQLAREATRT 
VRLTAGRVEA LAGAA