Gene Plim_2505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2505 
Symbol 
ID9139216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3263317 
End bp3264321 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content53% 
IMG OID 
Productphenylalanyl-tRNA synthetase, alpha subunit 
Protein accessionYP_003630530 
Protein GI296122752 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.460624 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACAG CCTACGAGGC CTTTCAGGTC TTTGAACAAG AGGCAACCGC AGCGATTGAA 
GCGGCACGAA ATGTGGCTGA TCTTGAGCAG GTACGCATCC TCTTTCTCGG GAAAAGCAAA
GGGCGATTGA AAGACCTGCA AAGTGAACTG GGGAAAGCGA CTCCCGCAGA AAGACCGGCC
ATTGGTCAGG CCTTTAATGA TATGAAACTG CGGGTCACTC AATTGTTTGA TGCCCGGGTG
GAAGTGCTTT CTCGTCCGGA GAGCCAGCCT CGAGACTTTG ATGTCACGTT GCCGGGAAAT
CTTCCGAGGT TAGGACGGGA ACATCCTATT ACTCAGACGA TTGAAGAATT CAAAGAGATC
ATCGGTCGCT TTGGGTTCAC TGTCGATGAT GGCCCTGAGC TGGAAGACGA ATATCACAAT
TTCGATGCGC TCAATATCCC TAAGGATCAC CCCGCACGGG ATCCACTCGA CAATTTCTAC
CTGGCGGCTG CTAAAACAGC GAACGGGCAG CCCATCCTTC TGCGAAGCCA GACCTCAACT
GTCCAGATTC GCGTGATGGA ACGAACGAAG CCTCCCGTCA GAATTGTCTC TGTGGGCCGC
GTTTATCGTC CGGATGAAAT CGATCGCACC CACCACCAGA TGTTCCATCA GATGGAAGGA
CTGATGGTCG GCGAAGGGGT CACGATGGCC ACTCTCAAGA GTGTGCTCAA GATGTTCGCG
GCCGCTTATC TGGGTGAAGA TGTCGAAATC CGCTTCCGCC CCTCATTCTT CCCGTTCACA
GAACCATCTG TCGAAGTCGA TGTCCGCTGG CGAGACGGCT GGCTGGAACT CGGTGGTGCA
GGGATGGTCG ATCCACAGGT TCTCGAAAAT GTCGGTTACG ATCCCGAAAC GATCACTGGC
TTTGCATTTG GATTAGGGAT TGCCCGCTTC TGTATGCTGC GCCACGGCAT CGACGATATT
CGACTTTTCT ATGAAAACGA CCTGCGGTTC CTGAAGCAAT TTTAG
 
Protein sequence
MSTAYEAFQV FEQEATAAIE AARNVADLEQ VRILFLGKSK GRLKDLQSEL GKATPAERPA 
IGQAFNDMKL RVTQLFDARV EVLSRPESQP RDFDVTLPGN LPRLGREHPI TQTIEEFKEI
IGRFGFTVDD GPELEDEYHN FDALNIPKDH PARDPLDNFY LAAAKTANGQ PILLRSQTST
VQIRVMERTK PPVRIVSVGR VYRPDEIDRT HHQMFHQMEG LMVGEGVTMA TLKSVLKMFA
AAYLGEDVEI RFRPSFFPFT EPSVEVDVRW RDGWLELGGA GMVDPQVLEN VGYDPETITG
FAFGLGIARF CMLRHGIDDI RLFYENDLRF LKQF