Gene Plim_2482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2482 
Symbol 
ID9139193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3237216 
End bp3238445 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content56% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003630507 
Protein GI296122729 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0321451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCCCT TCTGGAATTT CTGGAAGAAA GATCCCGTCG CGAGCATCGG TGGCACAGCG 
GCTGGTGCGA CGAAATCAGA TCGACCACCC GTCGATTTTC CCACTCCAGT CCTCTGGCTG
TTGGGAAAAA CCGGCAGTGG GAAAACCTCG ATTATCCGCT ATCTTACGGA ATCAACCACT
GCCGAGATCG GGAATGGCTT CAGGCCGCAA ACAAAGTGCA CGAATCGATA TGACTTTCCA
TCTGTCGAGA AGCCCCTGCT GACCTTTCTG GATACACGCG GATTGGGTGA AGCTGGTTAC
GACCACGAGC CCGATGTGGC TTCGCTGGCA ACACAGGCCC ATCTCATTCT GCTCGTTGTG
CGGGCCATGG ATCATGCACA AGCCGAAATG GTCGCCCTGC TACAGCAGAT TCGTAAGCAA
TCGTCACAAA TCCCCATCCT GCTCGTACTG ACTCATCTGC ATGAGGCTTA TCCGGGACAG
GATCATCCGG CAGAAATGCT GGCAGCCGAG AAGTCGAACA TCACCCCACA GATGCCTCCC
TGGCCATCAG CACTGGCGCG ATCGATCGAG CAGCAACTGA TGACCTTCGG CCAGTTCATC
CATGGGCACG CGACCATTGA TTTCACACAA CCCGAAGACG GCTTTACGAA CCCATTTCTG
GGGGCTCAAG AACTGACCCG CGATATCTGC TCGCTTTTGC CCGATGCCGC CATGGTACAA
CTCTCGCAAC TGCAGCAGTT TCAGCGTGCT CAGGCCGGAT TGCCCGCCAA TCTCACCACC
CGGCTGCAGC GCACACTCTG GATTTACAGC AGTGCTGCAG CAGTGGCTGG TGCCATTCCC
GCCCCGTGGT TTGATCTTCC TGTTGTGGTG GGATTACAAG CAGCACTGGC CTGGCAGATC
TCGAATGAAT ATCGCTATCA ATATTCGGGT TCGCGGATTG CACAACTGGT TTCGGCAGTC
TCCGGCCAGA TGATTGCCCG TCAGGGTCTG CGCGAGCTCC TCAAGATCAT TCCTTATGTC
GGCTCTGTCA CGTCGTCGGC GCTGGCATTT GCCACAACTT ACGGGCTCGG CCAGACCATC
ATCTGGGCCA TTGAGCGCGA ACGATCAGGC CAGTTTCCAT CCACTCAGGA ATTTCGTGAG
CACCTCAAAA ATCAGGCCAG CCTGGCAGGA GAAATCTGGA GGAAAAGATC TCCTCCTGAG
AATTCATCGT CGGATAGGAT GCCCGGCTAA
 
Protein sequence
MAPFWNFWKK DPVASIGGTA AGATKSDRPP VDFPTPVLWL LGKTGSGKTS IIRYLTESTT 
AEIGNGFRPQ TKCTNRYDFP SVEKPLLTFL DTRGLGEAGY DHEPDVASLA TQAHLILLVV
RAMDHAQAEM VALLQQIRKQ SSQIPILLVL THLHEAYPGQ DHPAEMLAAE KSNITPQMPP
WPSALARSIE QQLMTFGQFI HGHATIDFTQ PEDGFTNPFL GAQELTRDIC SLLPDAAMVQ
LSQLQQFQRA QAGLPANLTT RLQRTLWIYS SAAAVAGAIP APWFDLPVVV GLQAALAWQI
SNEYRYQYSG SRIAQLVSAV SGQMIARQGL RELLKIIPYV GSVTSSALAF ATTYGLGQTI
IWAIERERSG QFPSTQEFRE HLKNQASLAG EIWRKRSPPE NSSSDRMPG