Gene Plim_2481 details

Gene Information

• Locus tag: Plim_2481
• ID: 9139192
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 3236635
• End bp: 3237216
• Gene Length: 582 bp
• Protein Length: 193 aa
• Translation table: 11
• GC content: 55%
• Product: isochorismatase hydrolase
• Protein accession: YP_003630506
• Protein GI: 296122728

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0495569
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTCGAGA CAATTCGCAA GCCCCCTTTG TCACTCGAGG CGAGTTTATC GACGCTGATT 
GTCTGCGATC TGCAAACCAG ATTGTTACCA GTCATTCATC AATCGGAACG AATCGTTCGT 
CGGGTCGAAG TTCTGGTACA GGCCGCTGCC AGCTGGCCCA TCCCCATCAT CGCCACGGAG 
CAGTACCCGG AAAAGCTGGG CTCAACCATC GAAAGCCTGC AAAGCTCATG CACTCAAGTG 
CTTCCCAAGT TCGAATTCAG TGGCTGGTCG GCCCTCAATT GGAAGCCTGC TCACGATTCG 
GCGGTGGAAC GAACCCAAAT CGTCTTGTGC GGGATTGAAT CGCATATCTG CATTCTCCAG 
ACAGCACTCG ACCTGCTGGC CCAGGGCTAT CAGGTCTTTG TCCCTTACGA TGCCACCGGC 
AGCTATCGCC CCGAAGATGT CCAGTGGGCA CTTCAGCGAA TGATGCAGGC GGGTGCCACC 
ATCGTTTCGA CCGAATCTGT TCTGTTCGAA TGGTGCCAGT CTTCGAAGGC ACCACAGTTC 
AAGACGATCA GCCAGCTCAT TAAATCGACA CGAGGTGACT GA 

 

Protein sequence

MVETIRKPPL SLEASLSTLI VCDLQTRLLP VIHQSERIVR RVEVLVQAAA SWPIPIIATE 
QYPEKLGSTI ESLQSSCTQV LPKFEFSGWS ALNWKPAHDS AVERTQIVLC GIESHICILQ 
TALDLLAQGY QVFVPYDATG SYRPEDVQWA LQRMMQAGAT IVSTESVLFE WCQSSKAPQF 
KTISQLIKST RGD