Gene Plim_2471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2471 
Symbol 
ID9139182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3223362 
End bp3224378 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content52% 
IMG OID 
Productprotein of unknown function DUF1559 
Protein accessionYP_003630496 
Protein GI296122718 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTTCT CTCGTTCCGG TTTTCCCGGT GTTTCGCAAG CTCGAAGAGG TTTTACGCTG 
ATTGAATTGC TGGTGGTGAT TGCCATCATC GCAGTGCTGA TTGCACTGTT ACTACCAGCT
GTTCAGCAGG CCCGTGAGTC TGCCCGAAGA ACACAATGCA GGAATAACCT CAAGCAGCTC
GCGCTTGCGG TTCATAACTT CGAGAGTACC TACGGGCGTC TTCCAAGTGG TCCCTTGAAC
GATGCGGGAA CCCCTGCACT GGCTCACCCA CCTTCCACTG CCTCAAGGGT CAGCACACTC
GTCCATTTAC TGCCTTATAT GGATCAGGCT CCGTTGTTTA ATACGATTGA TCCTAATCAA
CTCAATCCGG ACATCCTGCC ACCCAATCAG ACTAACTGGT TTTGGGATGC GGGATGCAAT
CGCGCGGCAG CCACTTTGAT TCCGGGATTT ATCTGCCCGT CGGATTCGAT GGCAAATCAG
GATCCTACCG CCCAAGTGGT GATCGGTCTT TCCTGGATTC AGACATCAGG TGGCGGGTCA
CGCAGTCTTT CGTTCTTCTC TCCCACGACT GTTCCAACCA CCGCAACAGG GTTACCAGCG
AGCAGTTTCA AGCGTAGTAA TTATGCGATG TTTGCTGGGG TCTACGGTGA TGTCTCCGGT
TGGGGGTTGT ATAAAGGAAT TGCGTGCAAC CGCAGCAAAA AGCGGATGAG AGATATTTCC
GACGGTACGT CGAACGTGAT GATGTTCGGT GAGCAGATTG GGGGCATCAC TACGCAAGGT
TCGCTCGCAA GTAGCATGAG CTGGATGGGT GCCAGCGCGA AACTCACTTT TCCAGGTATG
TTCCTTGCCA ACCCAGCCAC AGCTGATGCA TGGCGTTTCT CCAGCCCTCA TGATGGGATG
ATGCACGTCG CGATGTGTGA TGGTTCAGTT CGTGTGCTCA ATGCGAACAT GAACACAACG
GTCTTCCAGT ACTACCTGGC TGGTGCCTCA GATGGAAATA ACGTTGGGGA ATTCTAA
 
Protein sequence
MVFSRSGFPG VSQARRGFTL IELLVVIAII AVLIALLLPA VQQARESARR TQCRNNLKQL 
ALAVHNFEST YGRLPSGPLN DAGTPALAHP PSTASRVSTL VHLLPYMDQA PLFNTIDPNQ
LNPDILPPNQ TNWFWDAGCN RAAATLIPGF ICPSDSMANQ DPTAQVVIGL SWIQTSGGGS
RSLSFFSPTT VPTTATGLPA SSFKRSNYAM FAGVYGDVSG WGLYKGIACN RSKKRMRDIS
DGTSNVMMFG EQIGGITTQG SLASSMSWMG ASAKLTFPGM FLANPATADA WRFSSPHDGM
MHVAMCDGSV RVLNANMNTT VFQYYLAGAS DGNNVGEF