Gene Plim_2459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2459 
Symbol 
ID9139170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3207271 
End bp3208287 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content56% 
IMG OID 
Productprotein of unknown function DUF1559 
Protein accessionYP_003630484 
Protein GI296122706 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.813794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTTATC ACGATCCCAA ACTGCACCAG ACCTCTCGTG GTGGTGCCGC CGGCTTCACC 
TTGATCGAAC TGATGGTCGT ACTGACCATC ATTGGGGTAT TGCTTGCACT TCTCCTCCCC
GCAGTGCAGC AATCGAGAGA AGCGATGAGG GCCACTCAAT GCAAGAACAA CTTGCGGCAG
ATCGCTTTGG CTCTCCATCA GTTTCATGAT GTCCACCAGG CTTTCCCACC CGCCAGCATC
AAACCACGTC CCGACGGTGA CCAGAGCCAA ATCTGCGGAA GTTCTGAAGC AACCTGGTTG
ATTCGACTCT TGCCGTATCT GGAGAGGAGT CAGCAATACG CCGAATGGGA TGTCTCTGCA
CCCTTCATGA ACCATTCGGA AGAAGTCCGG CGACGCGCGG TCCCACACTA TCTCTGCCCT
TCTCGCAGGG GCCCTGACAA TGCCGTTTCC GAAGCACAGC AAGTTCTCCT GGCTGCTCCT
TGCGGCTGTG GATTCGATAT TGTCCTGCCC GCCGGGGCAA CCTCCGACTA CGCTGGCAAT
CTGGGAGATC TCTCCCCCGG AGCGAACTAC TCCGTAAACG ACTTCTATTG GGGCGGGAAC
GGAACCGGTG TGCTCATCAA TAGCCGTGGC GTTTGCGACT TACTAAAGCC GCTCGGCTGG
ATTGATCGTA TCAGCTTCAC CAAACTGCAG GATGGATCAT CGAATACATT ACTGGTGGGA
GAAATGCACA TTCCACGAGG AAAGCTCAAC GTTCCTCCCC ATAACGGTGC CGCCTATAAC
GGTGACCATT TCTCGGCCTA TGCCCGGATT GCTGGACCGG GGGCACCTTT ACAGCGCCCG
GATGGAATTG AAGCATCCTA CACGATTGGA ACCTACCGCT TTGGCAGCTG GCATCACGAG
ACCGTGAACT TCGCCCTTGC GGATGGAAGT GTCCGCAGCC TGTCATATCA CATGTCGACC
TCTGTGCTCG GTCATCTGGC CCACCGACAA GACGCGGCCC CAGCGGCAGA GAATTAA
 
Protein sequence
MRYHDPKLHQ TSRGGAAGFT LIELMVVLTI IGVLLALLLP AVQQSREAMR ATQCKNNLRQ 
IALALHQFHD VHQAFPPASI KPRPDGDQSQ ICGSSEATWL IRLLPYLERS QQYAEWDVSA
PFMNHSEEVR RRAVPHYLCP SRRGPDNAVS EAQQVLLAAP CGCGFDIVLP AGATSDYAGN
LGDLSPGANY SVNDFYWGGN GTGVLINSRG VCDLLKPLGW IDRISFTKLQ DGSSNTLLVG
EMHIPRGKLN VPPHNGAAYN GDHFSAYARI AGPGAPLQRP DGIEASYTIG TYRFGSWHHE
TVNFALADGS VRSLSYHMST SVLGHLAHRQ DAAPAAEN