Gene Plim_2447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2447 
Symbol 
ID9139158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3193712 
End bp3194188 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content61% 
IMG OID 
Product2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
Protein accessionYP_003630472 
Protein GI296122694 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0429379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGGA TTGGCATGGG GCATGACCGG CATCGTCTGG TCGCGGGGAA GCCCTTGTGG 
CTGGGTGGTG TGTCGATCCC GTTTGAACTG GGGCTGGATG GTCACAGCGA TGCGGATGTG
GTGCTGCATG CCCTGACGGA CGCATTGCTC GGGTCTTTGG CACTGGGAGA TATCGGCGAT
TGGTTCCCCA ATACGGACGA GCAGTGGAAG GGGGCCTCTT CAGACCGGTT TGTGGTGGCA
GCCATGGCGG CTGTGCGCGA GCGCGGGTGG GAAGTGTGCA ATGTCGATGC GACCATCCAC
GCCGAGCGAC CCAAACTCTC GGCATATAAA TCAGCGATTG CGGCCCGTAT GGCGGAACTC
CTGGGCGTTG AGACTGACCA GGTGAGCGTG AAGGCCAAAA CCGGTGAAAA AGTCGGCCCT
GTGGGACGCG GCGAGTGCAT CGATGCCGAT GTGATTGTGC TGGTGCGGAA GGTATGA
 
Protein sequence
MQRIGMGHDR HRLVAGKPLW LGGVSIPFEL GLDGHSDADV VLHALTDALL GSLALGDIGD 
WFPNTDEQWK GASSDRFVVA AMAAVRERGW EVCNVDATIH AERPKLSAYK SAIAARMAEL
LGVETDQVSV KAKTGEKVGP VGRGECIDAD VIVLVRKV