Gene Plim_2439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2439 
Symbol 
ID9139150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp3181986 
End bp3182705 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content55% 
IMG OID 
Productprotein of unknown function DUF502 
Protein accessionYP_003630464 
Protein GI296122686 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0913477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAATA GCCCCGCACC CACAGCACAA ACTTCCCGCA CTTATCCGGA ACGTGTGGGC 
ATCACTTTTG TCACAGGGTT AATTGGTCTC CTGCCTCTGG CGTTAACATT GGCTGTTCTG 
GTCTGGGTCG TGAGGTTAAT CCACGACCTG TTTGGGCCTC TCAGCCCTTT CGGCAAAGCC 
CTCATGTCCA TTGGCATGCC CCTCGTGGCT TGCGAAACCA CGGCTTACCT GATTGGCATC 
CTCGGAGTGG TCCTCGCCAT TTATGGCATG GGAGCACTCG TGGAAAATGG CATGGGTGGA 
GGCTGGCAAC GCATGCTGGA TCAAGGGTTG CGACGTATAC CGGCCCTTGG AACGATCTAC 
GATGCCTCGA AACATGTCAC CAGTCTGTTC GATCGAAAAA AAGATTCACT CCAATCCATG 
ACGCCCGTCA TGTGCTTTTT TGGAGATGGC AGTGATATCG GAACTCCGGC ACTGATGCCC 
ACTTCCGAAC TCGTTCATTT TGGAGGCGAA GCCTACCACA TCGTCATTTT GCCCACAGCC 
CCTGTCCCCT TTGGCGGAGC TTTGCTCTGC GTCAAACAGG CTTGGGTCAA ACCCGCCAAT 
TGCAGCCTCG AAGACCTCGT TGGCATTTAC GTCTCCATGG GAGTCACAGC CCCCAAAAGC 
CTCAGCAAAC CCGCTTCTCC CACGGGGCCA GAGCCTGCTG CCCCACTTGA AAAATCATGA
 
Protein sequence
MANSPAPTAQ TSRTYPERVG ITFVTGLIGL LPLALTLAVL VWVVRLIHDL FGPLSPFGKA 
LMSIGMPLVA CETTAYLIGI LGVVLAIYGM GALVENGMGG GWQRMLDQGL RRIPALGTIY 
DASKHVTSLF DRKKDSLQSM TPVMCFFGDG SDIGTPALMP TSELVHFGGE AYHIVILPTA 
PVPFGGALLC VKQAWVKPAN CSLEDLVGIY VSMGVTAPKS LSKPASPTGP EPAAPLEKS