Gene Plim_2438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2438 
Symbol 
ID9139149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3181184 
End bp3181606 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003630463 
Protein GI296122685 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0716881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCACG AGATTTCATA CAAAGTCGTC AAACGACTGG CCGCTGCTGA GGGATATCTG 
GAACTTGAAC TGCCACAGGC AGCTCTTTCC GAACTCAATC GAATCGACGA TGCCGGCCCT
TTCAATGCCA TCGAGCAGTT GCTGCGAGGC GAAGCTCTCA CAGGTCTCAG CCAGTTCGAC
GAAGCGATTG AGCCCCTGAA GAAAGCTGCC GACCTGTTCC CTGCCCCCAT GAATCGCCGG
GCCTGGGCCA GTCTTTCGAA ATGCTACGCC TCCACCGGCC AGGATTCGCT GGCGAATGAA
GCTCTGGTCG CCAGCCAGAC TGAAGATGCT TCTCAAGGCC AGCCGGGAGT GATCGTGCAG
GTCGTCATGC AGCCGATCTT TACGGCCGTC CTGGGCAATC AAGTCCGGCA AATCCAGCGA
TAA
 
Protein sequence
MNHEISYKVV KRLAAAEGYL ELELPQAALS ELNRIDDAGP FNAIEQLLRG EALTGLSQFD 
EAIEPLKKAA DLFPAPMNRR AWASLSKCYA STGQDSLANE ALVASQTEDA SQGQPGVIVQ
VVMQPIFTAV LGNQVRQIQR