Gene Plim_2435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2435 
Symbol 
ID9139146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3175085 
End bp3176236 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content53% 
IMG OID 
Productprotein of unknown function DUF1573 
Protein accessionYP_003630460 
Protein GI296122682 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCTG CTGCCATGGC TGTTTGTGCA TTTTTGACGG TGATGACGTT AGCAGCGATT 
GCGTTTTTCG GCCGTGGAAC TGCGACGTTA CCGGTCAACG TGGCTCAGCC TGTGCCAGAA
ACTGAAATTG GCCCTAAAGT GGCCAAAGAA GGGCCACAGC CCAAAGCGGT GATTCCTGAA
GTGGAGTACG ACTTCGGGAA AATGGAAATG GGCGACGAAG GATCGCATGT CTTTATCATT
AAAAATGAAG GCGAAGCACC GCTGGAGATC CTGGCCCGTA AGGAAGAAAC CACCTGCAGT
TGCACCGTGG GGAATGTGGC GGGTGATGGT AAGCTGGCAC CCGGTCAGCA GACGGAAGTC
ACTTTGAACT GGAAGATCAA GCTCGCAAAT CCCAGCTTCC GGCATCATGC GGTCATTCGT
ACTAATGATC CTGGTAATCG CCGAATCGAA CTGACGGTGG TCGGGAAAGT GGAAAACGGC
CTGCAGCTCA AACCCGAAGG GGAATGGGCG ATGGGGCAAT TGAAAATTGG AGCACCATCG
GAAGCGACGG GTTCGATCTA CAGCCCGCTG TTCGACAAGT TCGAAATTAC GGAAGTCAAA
ACGGATCTTC CCACCACACA GATCACCTGG GTGCCTCTGA CTGAAGAACA ATTGGGCGAA
CGCGGTGCGA AATCTGGTTA TCTGCTGAAG GCGACTGTTT CCGGTGATGT CCCGGTCGGC
AGCTATTCTG ACCGGGTCGT TTTACAGACC AGTCTGGAAA AGCATAAGGA AGTCAGCTTT
ACCATCAAGG CGACTCGCCC CGGGCCGATC GATGTCATAG GACGGGGCTG GGCCAATGAA
TCGACCGCTC TGATCTTAGG CGATTTTCCG GCCAAAGACG GGAAGACGGC CGAGTTGTCG
CTCTTTGTGA GGGAATTGGA AGGGGATCTG GAGCTTAAAA GCTACGAGAC CGCTCACAAT
GCGGTGGAAG TCGCCTTGCG AAAGGACGAC AAGTACATGG GCAAAGGGGT GCAGCGATAC
TTTCTGACAG TCAAGGTTTT GCCTGGTCTC CCTGCCGACC GGCAGTTCAA GAAATCCGAG
AAAGTGATTC TCAAGTTGAA TCATCCACTC ATCCCGGAGT ACAAGTTCTT TGTCAGCTAT
CTATCGCTGT AA
 
Protein sequence
MKPAAMAVCA FLTVMTLAAI AFFGRGTATL PVNVAQPVPE TEIGPKVAKE GPQPKAVIPE 
VEYDFGKMEM GDEGSHVFII KNEGEAPLEI LARKEETTCS CTVGNVAGDG KLAPGQQTEV
TLNWKIKLAN PSFRHHAVIR TNDPGNRRIE LTVVGKVENG LQLKPEGEWA MGQLKIGAPS
EATGSIYSPL FDKFEITEVK TDLPTTQITW VPLTEEQLGE RGAKSGYLLK ATVSGDVPVG
SYSDRVVLQT SLEKHKEVSF TIKATRPGPI DVIGRGWANE STALILGDFP AKDGKTAELS
LFVRELEGDL ELKSYETAHN AVEVALRKDD KYMGKGVQRY FLTVKVLPGL PADRQFKKSE
KVILKLNHPL IPEYKFFVSY LSL