Gene Plim_2434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2434 
Symbol 
ID9139145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3173177 
End bp3174949 
Gene Length1773 bp 
Protein Length590 aa 
Translation table11 
GC content54% 
IMG OID 
Product5'-nucleotidase/2' 3'-cyclic phosphodiesterase-like esterase 
Protein accessionYP_003630459 
Protein GI296122681 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.189389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCGTC ATCGTCGTCA GCGTGCTATT TCCTGTCCTC TGGGTGGTCA AAATCGCCCC 
GCGCAGTCCA CTTCACCTAA ATTGGGCCGG GTGCTCTGGC CCTGTCTTCT GGGACTGGCT
TGCCTGACAA CTCTGCTCAC TGGAGGGGCG TGGGTCACGC GACTTGTTCC CAGCGATGCA
CAACTGGCAA GCCGAACTTC AACACAAGCT GTCTCCAGCT CTTCTTTGCC GTTACAGAAC
TCTGTATTGT CCGTCATCCC CTGGAATACG ACCCTTGCAC AGGCGGCTCA AGTGCCAGCC
GGGCAGCTTC CTTCGGATAC CAAATCATCA GAAGCCACAT CCCAGTCCAC CAGCCATACC
AGTGAACCGC CTGTGGCGGA AGACTGGCCT CGCCCGCAAG CGGTCCTCAT GCTCTCGGCA
GAAACGAATG GCTATCTCGA ACCTTGCGGT TGCTCATTAA CCCAATCGGG TGGGATGTCG
CGCAGGCTCG ATCTTTTCCA GCGGCTTACC AAAAGAGGTT GGCCCGTCGC GGGGCTGGAT
GCCGGGGGAT TCGTCAAGCG TTCCCGCCGC CAGGATCAGA TCAAGTACGA AGCGATTCTG
ACGGCTTTGC GATCACTCAA CTATCAGGTG ATTGGCCTGG GGCCTGCGGA TCTCCGTCTG
GGGGCCGACT TCCTGCTGAC ACAACAGGTC GCTGATCCTG AGGAAGTGCA GAAGTCGCTC
GCTATTTCTG GAGCGAATGT CACTTTCTTT GAATCACCCG ATCTTGGCAC TCCACTGCGT
ACAAAGACCT TCAAGATTGG CGAAGTGAAA GCCTGTGTGG TTTCAGTCCT TGGGAAAAGC
CGAAGAGATG ATGTCGCACC GGCCGGTGTG GCCAACAACA TCACCTTCAG CGATCCCGAT
GAAGAGATTC GTAAAGCAAT TGAGCAGTTC AAAGGTGAGA AGCCGCATCT GCTGATTCTG
TTGAATAATG GGACTGTCGA TGAAGCGAAA GAGTTCGCCC GCAAGTTCCC TGCGTTTCAG
TTGATTGTCA CGACGGGAGG GCCGGAAGAT CCTCAATCGA AACCTGTGAT GGAAGGTCGC
TCGTGGATCA TTCAGCCTGG CCAGAAGGGT AAGTATGTTT CGCTGGTGGG CTATTTTCCG
GATGATGTAA AGACTCCATT CCGTTACGAA CTGATCGATC TCGACAATCG CCGGTTCAAA
GCGACGAAGC CGATGGAAAA CCTCATGGCC GACTATCAGA AGCGGCTGGA GCTTGAACAA
ATCTCTTTAA CACCAGAACT GGTCATTCCT CACCCGAGTG GACGCAAATT TGTAGGTTCT
AAAGTGTGTG GCGATTGCCA CACGAAAGCG TATGAAAAGT GGGAAGAAAC CGGCCACGCC
AAAGCGACTA AAAGTATCAT CCATGGTCGT GGGGGGATTG AAGGGGAGTA TATTTCGCGC
ATTTACGACC CGGAATGTAT TAACTGCCAC ACCACAGGGT GGGAAGCACA GCAGGTTTTG
CGGTATGACT CCGGCTACCG CGATCTGGAA ACATCGGCCC ATCTTTTCGG AAATGGCTGC
GAAAACTGTC ACTCTCCCGG GAGTGAGCAT GTGCGGATTG AAAATGGTGG CAAAGCGACT
GAAGAAGAGC AGGCCGCCGC TCGGCTGGCC ATGCGTGTGA CACTCGATCA GGCGAAAAAG
ACAACCTGCT ATCAATGCCA CGATGGAGAT AACAGCCCAG GGTTTGAATT CGACAAATAC
TGGAAAGAAA TCGCTCATCC CTGGAGAGAT TGA
 
Protein sequence
MPRHRRQRAI SCPLGGQNRP AQSTSPKLGR VLWPCLLGLA CLTTLLTGGA WVTRLVPSDA 
QLASRTSTQA VSSSSLPLQN SVLSVIPWNT TLAQAAQVPA GQLPSDTKSS EATSQSTSHT
SEPPVAEDWP RPQAVLMLSA ETNGYLEPCG CSLTQSGGMS RRLDLFQRLT KRGWPVAGLD
AGGFVKRSRR QDQIKYEAIL TALRSLNYQV IGLGPADLRL GADFLLTQQV ADPEEVQKSL
AISGANVTFF ESPDLGTPLR TKTFKIGEVK ACVVSVLGKS RRDDVAPAGV ANNITFSDPD
EEIRKAIEQF KGEKPHLLIL LNNGTVDEAK EFARKFPAFQ LIVTTGGPED PQSKPVMEGR
SWIIQPGQKG KYVSLVGYFP DDVKTPFRYE LIDLDNRRFK ATKPMENLMA DYQKRLELEQ
ISLTPELVIP HPSGRKFVGS KVCGDCHTKA YEKWEETGHA KATKSIIHGR GGIEGEYISR
IYDPECINCH TTGWEAQQVL RYDSGYRDLE TSAHLFGNGC ENCHSPGSEH VRIENGGKAT
EEEQAAARLA MRVTLDQAKK TTCYQCHDGD NSPGFEFDKY WKEIAHPWRD