Gene Plim_2416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2416 
Symbol 
ID9139127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3150996 
End bp3151976 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003630441 
Protein GI296122663 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCCAA AACAGCTCTC CGAATGTGCC GCAGCCATTC ACCGACTCCT CAAACACGCC 
CGAATGACAT GGCTTCTAGG TTCTCTGGCC TTCATGGTAT GTGATGGGAA TTCCGCTGCC
TGTCAGGCCT CCGATCCACC CCTGGAACAG ACGGCAAACG CCACCGAAGT CTTCTCCCTC
TCGGAAATCT CTTCGAAGCT GAAGGAGCTA CCACCCAGCC TCGCCCAATG GCAGGGCTTT
CCCGTCCATC AGCTCGAAAG TGGTGGCAGA CAGGCCATGA TTGTCATGCC CAAGATGGCA
CACAACATTC CCGAAGGCCG CGGCAAGCCC TGGGTCTGGA TTGGCGAGTT CCCCCATGTG
CTCAATGACT TTGAAACCCG CATGCTGCGG GAAGGGTTCG CCATTGTCTA TTTACCCACT
CCCAATCAGT TCGGATTAGC CCCCGCCATG AAAGCGTGGG AAGAATTCTA TGACCGTCTC
ACGCGCGACT ATGGCTTTGA CCAGCAACCC GCACTCGTCG GCATCAGCCG GGGTGGCTTA
TACGTTTACA ACTGGGCCTC CCGGCATCCC GACAAAGTCT GCTGCATTTA CGGCGACGCC
CCGGTGTGTG ATATCCTGAG CTGGCCCGCT GGTCAACCTG TCAACGCCCA ATACAAAGGG
CCAGGCAGCG CTCCCAATTG GAAAGCACTC AAGGAAATAG CCGGGATCGC CAGCGATGCC
GAGATCGCCA AAGCCGGCTT AAGCCCGATC GATCAACTCG AACCCCTGGC CAAGGCAAAC
ATCCCCCTGC TCCATGTCTA TGGCGATGCC GACGAAGTCG TACCCTGGGA TGAAAACACG
GGAGTACTCG CCACCAGGTA CAAGGCCCTG GGTGGCGAGA TCACCCTCAT TCCCAAGCCC
GGCGTCAAAC ATCACCCCCA CGGACTGACC GATTCCACAC CTATCGTCGA ATTCGTTAAG
AAAAGCTGGC TGAAGCAATA G
 
Protein sequence
MQPKQLSECA AAIHRLLKHA RMTWLLGSLA FMVCDGNSAA CQASDPPLEQ TANATEVFSL 
SEISSKLKEL PPSLAQWQGF PVHQLESGGR QAMIVMPKMA HNIPEGRGKP WVWIGEFPHV
LNDFETRMLR EGFAIVYLPT PNQFGLAPAM KAWEEFYDRL TRDYGFDQQP ALVGISRGGL
YVYNWASRHP DKVCCIYGDA PVCDILSWPA GQPVNAQYKG PGSAPNWKAL KEIAGIASDA
EIAKAGLSPI DQLEPLAKAN IPLLHVYGDA DEVVPWDENT GVLATRYKAL GGEITLIPKP
GVKHHPHGLT DSTPIVEFVK KSWLKQ