| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2415 |
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| Symbol | |
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| ID | 9139126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 3147988 |
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| End bp | 3150420 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | PAS sensor protein |
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| Protein accession | YP_003630440 |
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| Protein GI | 296122662 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGCCTA GTCCGCCAGA CAACCCTCGA GTTTCGAGGT GTGCCCGCGA TCCGCGCTGG
ATTGCGGGAG CCGTCGCTCT CTCGTTTCTC GGCCTGATTC TCTGGGATCG ATCCTGCTCG
CTCAATTCTG AACGCGATTC TCTGCTTCCC TCATCGAGCG TGAACCCTAG CGACTCGCCG
CCACTGGCAT CGTGTCCGAA ATTTATCCAG ACGGCTCATC TGGCCAGTAC CCATGAGATG
TGCCCGCTTC CGGCCTCTGC TTTCGGTGTG CCGGTTTCTG CGATATCGCC GGTCAATCGA
CTCGATCATG CACCGTCGCG GACTGGTGCA TCGATTGTCG ATTTCTTCAC TGGTGGCGGC
TATTACATGC CCCGCACACA TTGTCTGCTC ACATCTGAGG GGACAAGTGA TTGGCCGTGG
ATCATCGCGC TGCTGGTGCT GAATGCCGCG GTGATTGTGG CCTATCTACG AATTTTTATT
TTCTGGATGA GATCGTACTT CGACGAGCGG GCTGAGGATC GCAATCAGCA GTTGTTCGAT
CTGGCCGCGA TTTTTCTCTT CTGCGCGATC TGCGGCTATG CCATGTCGAT GCTGATGTTT
GTGTGGCCCG CCTACCGGCT GCTGGCATTC TTCCTTTTGG CACTCAATAT CTTTTCCTGG
CGATTCTGTA CCAATCTCGC ATCGTTCGGG AAGGTGTTTG CATCGAAGAG GTTGGAGCGC
CAGTTGCGTG AGGCGGTTGA GTCGAGGGCC GTCGAACTGG AGCGGCAGGT GAGGAACCGC
ACCTCCGAGG TGAACCGTCT AGCGGAGATC GCCCGCCGCA CAGCGAATGG TGTGGTGATC
ACCGATCGCA AGGGCCGTGT CGAATGGATC AATGAAGGGT TCACCCGTAT CTGCGGTTAT
ACGATTGAAG ACCTTCGCGG GAAGAAACCG GGAGACGTTC TGCAAGGTCC CAATACCAAC
CCCATGGCGA TCCAACGAAT TGGTGATGCG ATCCGCCAGG GGCTTCCCGT CACGGAAGAA
GTCGTGAACT ACTCCAAGAA CGGGCGAGAA TACTATATTC GCATTGAAAT CGATCCACTG
CGTGATGAAC GTGGCGAGAT CTCGGGTTTT ATGGCGATTG AAAGTGATAT CACTGAGCAG
CATCAACATC AGGAGGAACT CAAACGCCAC GCTGAGGAAA TGGAGCGTCT CAGGAATGCC
GCCGAATCGG CCAACCGTGC CAAGACCGAT TTTCTCGCGA ATATGAGTCA TGAAATCCGC
ACGCCGATGA CCGCGATTCT GGGCTATACG GAACTCCTGG CCGAGAATAG TGATCCGGCC
GGGACGACTT CGGCTGAGCG TATCGAGTGC ATTGAGACGA TTCGCCGCAA CGGAGACCAT
CTTCTGGAGA TCATTAACGA TATCCTCGAT CTCTCGAAGA TCGAAGCTGG CATGATGACT
GTCGAGAAGA TTCCCACGGA TCTCGCGTAT CTAGTTAAAG ATGTCGAATC CCTGATGCAG
TTCAAGGCGA CTCGCAAGGG GATCAATCTC CGTTTGAACC TTGTGGAACC ACTGCCCACG
ATCATCCATA CGGATCCTGT GCGGCTGAAG CAGATTCTCG TGAATCTGCT GGGGAATGCC
ATCAAGTTTA CCGAGCATGG CGAAGTCTCG ATGAAGGTGC ATACCGATGC GAATACCTTT
CCGGGCTTAA TCGTGATCGA TGTTGTTGAT ACTGGTATCG GGATGACTCC GCAGCAGATG
AGTCAACTCT TCGGCGCTTT TGTGCAGGCC GATACCAGCA CCACGCGCAA GTTTGGCGGC
ACTGGTCTTG GACTGCGCAT CAGCAAAAGT CTGGCTCAAC TTCTGGGTGG AAACATCACG
ATCAGCAGCG AGCCAGGAAA GGGGAGTGTC TTTCAACTCA CTATTTCAAC GGGGCTGGCT
GAAGCGCCAC ATGAAGTCGT CACAGAGGTC AAGCCCGAGA GTTCCACGAA ACGACTGGTG
AAAGAAGAGT TGGCAGTGGA GATTGTCAAA CAGCTCCCGC TGGATGGCTT GAACATCGCT
CTCGTTGAGG ATGGATTGGA TAATCAGCGA CTCATTGCTT TTCATCTTCG TAAGGCGGGC
GCAGATGTCG CGGTGTTTGA CAACGGGAAA CTGGCACTCG AAGCGATGAC ATCCGACGGA
ACGATTCAAG GTTCTCTGAA GAATGTCGGT CTGTTTGATC TCATTGTGAC CGATATGCAG
ATGCCTGAAA TGGATGGCTA TACCCTGGCA CGCTCATTGC GGACGAAAGG ATTCACTCAC
CCCATTATTG CCTTAACGGC GCATGCTATG GAATGGGACA AGAAACGCTG CCTCGATTCA
GGATGTGACT ACTATATTTC CAAGCCGGTG GATCGTGCGG CACTGATTGA TACTTGCCGT
AATGCGGTAG CGGCATCGAT CAATACAAAT TGA
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| Protein sequence | MPPSPPDNPR VSRCARDPRW IAGAVALSFL GLILWDRSCS LNSERDSLLP SSSVNPSDSP
PLASCPKFIQ TAHLASTHEM CPLPASAFGV PVSAISPVNR LDHAPSRTGA SIVDFFTGGG
YYMPRTHCLL TSEGTSDWPW IIALLVLNAA VIVAYLRIFI FWMRSYFDER AEDRNQQLFD
LAAIFLFCAI CGYAMSMLMF VWPAYRLLAF FLLALNIFSW RFCTNLASFG KVFASKRLER
QLREAVESRA VELERQVRNR TSEVNRLAEI ARRTANGVVI TDRKGRVEWI NEGFTRICGY
TIEDLRGKKP GDVLQGPNTN PMAIQRIGDA IRQGLPVTEE VVNYSKNGRE YYIRIEIDPL
RDERGEISGF MAIESDITEQ HQHQEELKRH AEEMERLRNA AESANRAKTD FLANMSHEIR
TPMTAILGYT ELLAENSDPA GTTSAERIEC IETIRRNGDH LLEIINDILD LSKIEAGMMT
VEKIPTDLAY LVKDVESLMQ FKATRKGINL RLNLVEPLPT IIHTDPVRLK QILVNLLGNA
IKFTEHGEVS MKVHTDANTF PGLIVIDVVD TGIGMTPQQM SQLFGAFVQA DTSTTRKFGG
TGLGLRISKS LAQLLGGNIT ISSEPGKGSV FQLTISTGLA EAPHEVVTEV KPESSTKRLV
KEELAVEIVK QLPLDGLNIA LVEDGLDNQR LIAFHLRKAG ADVAVFDNGK LALEAMTSDG
TIQGSLKNVG LFDLIVTDMQ MPEMDGYTLA RSLRTKGFTH PIIALTAHAM EWDKKRCLDS
GCDYYISKPV DRAALIDTCR NAVAASINTN
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