Gene Plim_2396 details

Gene Information

• Locus tag: Plim_2396
• ID: 9139107
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 3120531
• End bp: 3121316
• Gene Length: 786 bp
• Protein Length: 261 aa
• Translation table: 11
• GC content: 54%
• Product: LmbE family protein
• Protein accession: YP_003630421
• Protein GI: 296122643

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.629965
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGCGCG ATATTTTGAC CTCGACTCAC GATGAACTGG ATGTGATTGC CGTCGGTGCT 
CATCCGGATG ATGTGGAGAT TGGCTGCGGT GGAAGTCTCG CGGCTTTCGT ACAACTCGGC 
TATCGAGTGG GCATTGTCGA TTTGACAGAT GGTGAGCCGA CACCATTAAG CTCCGGCCGT 
GAAAGCCGAT TGGAAGAATC CCGCCTTGCT GCCGAGGCAC TGGGGATTCA CATGCGCCAC 
AATCTCCTGA TCACGAACCG AACGTTGTTT GACGGTTTCG GGCAGCGAGT GGCTTTGGCA 
AGAATCTTTC GTAAGTATCG TCCGCGAATT GTCCTGGGGA TTGCAGGCAA AACACCTATG 
GCCTCGCCCG ATCACTGGCA GGCAGCTCAG ATTACCGATG CCGCTGTTTT TTACAGCCGA 
CTTTCCAAGT GGGATGACGA GTTTGGCGAC TTACCAGTCC ACACGGTTTC AAAACAATTC 
TGGTATTCGC TGAGCCTGAG TTCGCTGGAT TCTCTCAGTG GGCCGAACTC CTTTGTGATG 
GATATCTCGG CCACTTTATC CCAGAAGATC GCCTCGGTAC GGGCCTACGA GTCACAGTTT 
CCGCCCACGA AAGATCGCGT CTTCCGTCTG ATCGAAGGAA CTTCGCGATG TGCCGGGGCC 
AGTTGCGGAT TTGAAGCGGG TGAAGTTCTT TTCTCAGTGA CAACCCTGGG TGTCAGCGAC 
CCGCTGGAGG CCTTTTTGCC ATCACGCCAG AAATCGGCAC CCGGCACGAG CGAAAAAAGT 
CAGTGA 

 

Protein sequence

MSRDILTSTH DELDVIAVGA HPDDVEIGCG GSLAAFVQLG YRVGIVDLTD GEPTPLSSGR 
ESRLEESRLA AEALGIHMRH NLLITNRTLF DGFGQRVALA RIFRKYRPRI VLGIAGKTPM 
ASPDHWQAAQ ITDAAVFYSR LSKWDDEFGD LPVHTVSKQF WYSLSLSSLD SLSGPNSFVM 
DISATLSQKI ASVRAYESQF PPTKDRVFRL IEGTSRCAGA SCGFEAGEVL FSVTTLGVSD 
PLEAFLPSRQ KSAPGTSEKS Q