Gene Plim_2389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2389 
Symbol 
ID9139100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3111922 
End bp3112767 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content54% 
IMG OID 
ProductFeS assembly ATPase SufC 
Protein accessionYP_003630414 
Protein GI296122636 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGCCT CGCTCAAGAT TCAAGACCTG CATGTTTCGG TGGAAGGACT CCCTATTCTT 
CGCGGCGTGA GCCTCGAAGT TCGCCAGGGT GAAATCCATG CTCTGATGGG ACCGAACGGC
TCGGGCAAAA GCACACTGGC TTATACGCTG GTGGGTCATC CCAAGTATGA AATTACACAG
GGTTCGATTG AGATCGATGG CAAGCCTCTC AATGAGCTGG ATGCCTGCGA GCGAGCCCGA
CTGGGATTGT TTCTGGCATT CCAGTATCCG ATTGTGATTC CGGGTGTGAA AGTGGCTGAC
TTTCTGCGTC ATGCGATTAC GAACATCCGT AATCCTGACC GCAAGGAAGG CGAAGGGCTC
ATCCCCATGC GGGAGTTCCG CAAGGAACTC AAGTCGATGA TGGATGAGTT GGGTATGGAT
AGCGAATTTG CCCGCAGATA CCTCAATGAA GGTTTCTCGG GTGGTGAAAA GAAGCGGATG
GAAATTCTGC AACTGGCGAT GCTCAAGCCA CGATTTGCTG TGCTGGATGA AACGGATTCG
GGTCTCGACA GCGATGCGGT TCGCGTGGTG AGCGAAGGTT TGCGAAAGCT CTCCGGCCCA
CAGATGGGCG TGCTGATCAT TACGCACCAC GAACGGCTGC TCGAATACAA CGTTCCCCAA
TTCACACATG TGATGCTGGC TGGAAAGATT GTCGAAACTG GCGATGCTTC ACTGGCTCGC
GAGCTTCATA ACGAAGGTTA TTCCAAAGTC AGGCTGCGCC ATCCGGAAGA AGCTGCTGAA
GAAGCGGCCC GTGCCAGTGG TCGTTCGTCA GAAGCAAACC TCACTGCGGA GCCCGCCAGC
GTCTAG
 
Protein sequence
MVASLKIQDL HVSVEGLPIL RGVSLEVRQG EIHALMGPNG SGKSTLAYTL VGHPKYEITQ 
GSIEIDGKPL NELDACERAR LGLFLAFQYP IVIPGVKVAD FLRHAITNIR NPDRKEGEGL
IPMREFRKEL KSMMDELGMD SEFARRYLNE GFSGGEKKRM EILQLAMLKP RFAVLDETDS
GLDSDAVRVV SEGLRKLSGP QMGVLIITHH ERLLEYNVPQ FTHVMLAGKI VETGDASLAR
ELHNEGYSKV RLRHPEEAAE EAARASGRSS EANLTAEPAS V