Gene Plim_2388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2388 
Symbol 
ID9139099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp3111175 
End bp3111852 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content54% 
IMG OID 
ProductNADH-quinone oxidoreductase, B subunit 
Protein accessionYP_003630413 
Protein GI296122635 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGCG AACAAACACC GTCCTCTGCT GCGGGAATCG ACTTCAACAA TAATCCTCTG 
CCGAGTGCTG GCAGCCCGTG GATTGAAGGG CGATTTGAAG AGAATCTGAT TGTCACCACG 
CTTGAACAGG CCATGAACTG GGGTCAGCTT TCGAGTGTCT GGCCGCTGAC ATTTGGGATC 
GCCTGCTGCG CCATGGAGAT GATGGCCACA GGGATGAGCA AATACGATCT GGATCGATTT 
GGTTCGGGAG CATTTCGTGC CACGCCTCGG CAAGCCGACC TGATGATTGT CGCGGGGACT 
GTCACTTACA AGATGGCCAG TCGTATCAGG CGGCTCTATG ACCAGATGCC AGATCCGAAA 
TACGTGATCG CGATGGGTGC CTGCACCATT GGTGGTGGGC CGTATTTCAA ATACGGCTAC 
CATGTGGTGA AAGGTGTCGA TCTGGTGGTT CCTGTGGATG TTTACATTCC CGGTTGCCCA 
CCTCGCCCTG AGGCATTACT CGAAGGGGTG ATGCGGATTC AGGATAAAAT TCGTGCCCGA 
AAGCTGGGCC GTAATACGGT GTCTCAACTC CCTGTGCCGC ATCGTTCGGG ATATGGGAAG 
CTGGCCCCTG TGGTCTCGAT TCCGTCGGTG ACTGCGCCAG TAACCAGCAA CAATACAACT 
GAGTTTGTCA GCACATAA
 
Protein sequence
MNREQTPSSA AGIDFNNNPL PSAGSPWIEG RFEENLIVTT LEQAMNWGQL SSVWPLTFGI 
ACCAMEMMAT GMSKYDLDRF GSGAFRATPR QADLMIVAGT VTYKMASRIR RLYDQMPDPK 
YVIAMGACTI GGGPYFKYGY HVVKGVDLVV PVDVYIPGCP PRPEALLEGV MRIQDKIRAR 
KLGRNTVSQL PVPHRSGYGK LAPVVSIPSV TAPVTSNNTT EFVST