| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2378 |
|---|
| Symbol | |
|---|
| ID | 9139089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 3100236 |
|---|
| End bp | 3101432 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003630403 |
|---|
| Protein GI | 296122625 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCGAT CTCTTCACAC CATGATGATC TTTGTCGGTC TAACAGGCTG GTTTGCCGCT
GCTGCTGATA CCTCAGCGAG TGAACTGCCG ACCGATCTCC AGCCCATTGG TGGTCACTGG
TTTCTCAAAA CCACTCCCAA ATCTGATAAG GCAAGTTCCG ACAGGCCCAT CTATTTCTAT
CGTGATGGTG AGCAATTTGT GGACTTGTTT TCCTATCACA CGAAAGATTC CAATCAGGAT
GGCATCGATA ATCTTCGCCT GAGCCACGAC GAAAAATTTC TGATCATCGA GAGCCAGGGA
TATCCCAATC ATCCCACAGC GATCTTCCCG AATTCAGGCA ACCCGAACTC GATCCGAGTC
CAATCGTTCA AGTTCCGCCT GCCTCTCCGG CCCCAACTGG CTAAGAGCAT CACTCGCTTG
CCGCGTGGCC CCATTGGCAT GGCGCTCAAT GGCGTCGTCT TTTTTAACCC CTTCGAAATG
GAAGGCCAGA ATGCTGTGGC CGGATATTCG GAGGTATGGC TCGATTCGTG TTGTGGCCAC
CCTCAGCAAA CGGGTGTTTA CCACTATCAT AAATATCCCA CATGCGTAAA AAGCCCTTTC
CGTGAAAATG GAAAGCAGCA TTCACCGATC ATTGGTTTTG CGTGGGATGG CTTCCCGGTC
TATGGCCCGT TCGAATCTGC CGGAGTGAAG GCGATGGATC TCCAGGGCCA GCAGGCACTC
GATGTCTGCA ATGGTCATAC CGATGAGCTT CGCGGATACC ACTATCATGT GACACCAGGA
CGCTTCCCTT ACATCCTGGG GGGATATGCC GGTGTGGTGG AAACCAGCAA CAGCCGTGAC
CTCAGGCGGC CGCAGCAGGG GGCCATCGAA GACAATACTC AACCAGGAAC TCGCATGGAG
GATGTCGTTG TTTCTGTCAG GCCAGGAACT GCTTCGCGAG GGAAAACACA TCAGATCCAG
TTGGTTCTGA AGCCCGAAAA CGCCCGCCGC CGGATCCCGG ACGGTACTCC TTCATGGATT
CAAGTGGGCC CGTATGAAGC GGCAAAGATC ACACGTCAAG GGAATCTCGT GACCGCCGAT
CTCACCATCC CTGACGACGC TGCTGTCGAT GTTATGCTCG ATGTTCATGT CGAATTTGGC
GGTAACCGAA ATCCTCTCGC CTATAAACGC AACGATGCCT TTCGAGTGGT GGAATGA
|
|---|
| Protein sequence | MLRSLHTMMI FVGLTGWFAA AADTSASELP TDLQPIGGHW FLKTTPKSDK ASSDRPIYFY
RDGEQFVDLF SYHTKDSNQD GIDNLRLSHD EKFLIIESQG YPNHPTAIFP NSGNPNSIRV
QSFKFRLPLR PQLAKSITRL PRGPIGMALN GVVFFNPFEM EGQNAVAGYS EVWLDSCCGH
PQQTGVYHYH KYPTCVKSPF RENGKQHSPI IGFAWDGFPV YGPFESAGVK AMDLQGQQAL
DVCNGHTDEL RGYHYHVTPG RFPYILGGYA GVVETSNSRD LRRPQQGAIE DNTQPGTRME
DVVVSVRPGT ASRGKTHQIQ LVLKPENARR RIPDGTPSWI QVGPYEAAKI TRQGNLVTAD
LTIPDDAAVD VMLDVHVEFG GNRNPLAYKR NDAFRVVE
|
|---|
| |