Gene Plim_2376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2376 
Symbol 
ID9139087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3098584 
End bp3099894 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content55% 
IMG OID 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_003630401 
Protein GI296122623 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAATTC GCCGCAGCTG TCATGGTACG CTTCTCTTCT TGGCACTCAT GTGCACCATT 
TCATCAGCGA CCGCCGCAGA CTGGGCTCAA TTCCGCGGTG CCGGAGCGAG CGGTGTGAGC
ACTCAATCCA AGCTCCCCAT CCGCTTTGGT GAAAACGAAA ACCTCTTGTG GAAAGTGGCA
CTTCCGGGTG CCGGTTCTTC GAGCCCTGTT GTCTTTGGGA AAAAGGTCTT CGTCACCTGC
TACTCCGGCT ACGGACAATC GAAATCGGAA GAGGGAGATA TCAATTCGCT GCAAAGACAT
CTCGTTTGCG TGGACTGCGA AAGTGGCCAC GTGCTCTGGA CGAAAACCAT CGCGGGAGAG
CAACCTGAGG ATAAATATCA GGGCTATCTC ACCGATCACG GCTATGCGAG CAATACACCT
GTCACCGATG GTGAACGGGT CTATTGCTTC TTTGGCAAAA GCGGGGTGCT TGCGTTTGAC
TTCTCGGGAA AACAGCTCTG GCAGACGAAT GTCGGCAAAG AGTCCAGCAG TCGCCGATGG
GGTTCAGGTG CCAGTCTGAT TCTTTACAAA GATGCTGTCA TCGTGAATGC GTCGGAAGAA
AGCCAGTCCA TTCGCGCACT CCATAAACTG ACTGGGGAAC TCCTCTGGAA TGAGACCGCG
TCGGCCTTGA ATCTGGCTTA CGGCACCCCT TCAGTGATTA CTGTCGATGA TAAACGCAGC
GATCTGGTGA TTGCCGTCCC GGGTGAAGTG TGGGGCCTGA ATCCTGATAC GGGCCGCTTG
CGCTGGAACG CCGAGCACAA CCTCACGGGC AATATCTGTC CCAGCGTCTT TTCTCAAGGC
GATGAAGTGT TCATCTTTGG TGGATTTCGA TCGGCGGGGA GCTTGTGCCT GAAGGCGGGC
GGGCAGGGAG ACGTCACCTC TTCTGTCATC AAATGGACCA GCCGCAACAG TTCGTATGTC
GCCACACCGG TCCTTTACGA GGGGCGACTC TACTGGATTG ATGATCGCGG GCAGGCATTC
TGTGCGGATG CCAAAAATGG TGAGCTGGTT TATCGAGAGC GTCTGGAAGA TCTCAGCTCC
GGTGGTCGGC CCGTCTATGC ATCACCTGTT GTCGCCCAGG GGCTGATCTA TGTTCCCACC
CGGTGGGACG GTATCCTGGT CTATTCGGCC AAAGAAAAGT TCGAGATTCT GGCATTGAAC
AAGTTGCCGT CCGATCAAAG TGACTTCAAC GCCACGCCGG CGATCAGCAA CAACCAGTTG
TTCCTCAGGT CAGATCGATT TCTGTATTGC TTCGCCGAGA AGCATCCGTG A
 
Protein sequence
MRIRRSCHGT LLFLALMCTI SSATAADWAQ FRGAGASGVS TQSKLPIRFG ENENLLWKVA 
LPGAGSSSPV VFGKKVFVTC YSGYGQSKSE EGDINSLQRH LVCVDCESGH VLWTKTIAGE
QPEDKYQGYL TDHGYASNTP VTDGERVYCF FGKSGVLAFD FSGKQLWQTN VGKESSSRRW
GSGASLILYK DAVIVNASEE SQSIRALHKL TGELLWNETA SALNLAYGTP SVITVDDKRS
DLVIAVPGEV WGLNPDTGRL RWNAEHNLTG NICPSVFSQG DEVFIFGGFR SAGSLCLKAG
GQGDVTSSVI KWTSRNSSYV ATPVLYEGRL YWIDDRGQAF CADAKNGELV YRERLEDLSS
GGRPVYASPV VAQGLIYVPT RWDGILVYSA KEKFEILALN KLPSDQSDFN ATPAISNNQL
FLRSDRFLYC FAEKHP