Gene Plim_2369 details

Gene Information

• Locus tag: Plim_2369
• ID: 9139079
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 3084901
• End bp: 3088458
• Gene Length: 3558 bp
• Protein Length: 1185 aa
• Translation table: 11
• GC content: 55%
• Product: AMP-dependent synthetase and ligase
• Protein accession: YP_003630394
• Protein GI: 296122616

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGACGC TCTCGGAGGC TAATTCCAAC CTACGGACTG ATGAATCGAC GGAATCTCCC 
CGCCCCGCCG ACCTGCATGA TCGTCTTTCG TCCATCAGCT TCGTCAGTCT TCTGGCCGTT 
CAGTTTTTGA CGGTGCTGAA TGATCATACA TTCCGCTGGC TGGTGGTTCC TCTGGCCAAA 
CGCCTTTTCC GCCATACACC CGGGAAAGTT TCTCTGGCAG AAGATGCTTC GATGCTGGCT 
CTCGGGCTGG CCGCCTTCAC GTTGCCATTT CTCTTTCTGG CAGCGCCGGC GGGTTATCTC 
GCAGACCGCT TCAGCAAGGC CAAGGTCATT ACCTGGTGCA AGCTGGCGGA AATTCTCATC 
ATGCTGGCGG GCTTTGCGGC TTTGGGCTTC AGCAACATCC CACTGCTTTT CATCGTGGTG 
GCACTTACGG GTGTGATGAA TGCCCTGTTT GCTCCAGCGA GGCAAGGGAG CATCCCGGAA 
CTTGTCCACG ATGGTTCGCT CTCGCGTGCC AACGGGTTGA TGGGGCTGAT GAACGTTGTC 
CCCTGTGCGC TGGGTTTTCT TTTAGGAAAC CTGCTGGCGA CACTCGCTCA ACCGGGCGAA 
AGTGACTCCA TTTCGTGGCA ATCGCTCAGT ACGGCGTTTG TGGTGATCAT GTCGATTGCC 
GTGCTGGGCT GGGTAGTCAG CCTGGGGATT CGCAGGGTGC CGGCTGGTGA TCCGGAGTGC 
CGCTTTCCGT GGAATTTTCC AGTCGATACC TGGCAAAGCC TGAAGCTCCT TTCGAGTGAT 
GTTTTTCTCG CCCGGACAGC GTTAGGTATT GCCTTCTTCT GGCTGCTGGC CTCGATGGCG 
CAACTCAACA TCGACACGTT TGCCGGTCAT GATCTGCAAC TCAAGCAGTG GCAGGTGGGT 
GTTTTTGGCA TGGTGCTGGT GCTGGGTGTC GGCATCGGCA GCCTGCTGGC GGGTTATCTC 
TCGGGTGGCC ATGTCGAATT GGGATTGGTG CCAATTGGCG CCATGGGTAT TGCTATCTGC 
TCTGTCGTGT TGTATCTCGC TGGCATTGTG AATGACGATC ACCGTCTGAT TGCCTTTGAA 
CTTTCGGTGG CTGGTCTGTT TTTCCTGGGT GTATTTGCCG GGTTATTTGA TGTTCCACTG 
GAAGCTTATT TGCAGCATCG CAGCGAGCCC AAAGTGCTGG GAAAAATTCT GGCAGCGACG 
AACTTTCTGG CATTCTCCGG AGCTTTGGCT GCAGCGGGGA TCTTTTATTT CTTACTCGCC 
GTTTTGCAAC TCAGCCCGGC TGCGGTATTT CTCGTCTGCG GGATTGGGAC AGTCCCCGTC 
GCCATCTACG TCATGTTCTT GATACCAGGT GCCATGTTTC GATTTCTATT CTTTATCTTT 
ACACATTCGT TCTATCGAAT TCGCCGCTAT GGTGAAGTCA ATATCCCCGA AAAAGGGGGA 
GCGCTGCTCG TCTCGAATCA CGTCACGTGG GTCGATGGCA TTCTGCTGAT GACGATGACT 
CCACGACCTG TGCGGTTCAT TGCCTATGCC GACTATGTGA ATAATCCGTG GCTGAAATGG 
CTGGCACGAA TTTTTGAGGT CATCCCCATT AAGGCGGATG GTGGGCCGAA AGCTCTCATT 
GAATCGTTAA GGACAGCCCG CAAAGCCATT GAAGAAGGAC ATGTGGTCTG TATCTTTGCC 
GAAGGGGGTT TGACCCGCAC CGGCCAGATG CAGCCTTTTC AACCTGGTTT TCTCAAGATC 
ATTCAGGGGA CCAATGCCCC GGTGATACCG GTCTATCTCG ATGGTTTGTG GGGGAGTATT 
TTCAGCTTTA AGGGCGGAAA ATTTTTCTGG AAATGGCCAA AGCGTCTACT CCTTCCCGTC 
AATATCCTCT ACGGTCAGCC CATTCACGAA CCCAAAACTG TTCATCAGGT TCGCTCAGCA 
GTCCAACTTC TGGGAGTCGA ATCCGTGCAA AAGCTTAAAT CGAAAGAGCC TTCCTTGCTG 
GCGGGATTTA TCAAGACCTG CCGGAGTGCC GGTAGCCGCA TTAAGGTGGC TGATTCTGGC 
GGCATGGAAC TGACAGGGAC CAAACTGCTG ATTGCCACGC TGGCATTTAA CCGGTTGTTC 
CGCCGAGAGA TTCCGGGCAA TGAGCAGGTG GTCGGGATCC TCCTCCCACC GACAGTGGGT 
GGAGTCCTCG CGAATGTGGC ACTTTCCCTG GCGGGCAAAG TGACTGCTAA TTTGAATTAC 
ACCCTTTCCG ATGCACAGCT CAATGCGTGC CTCGAACAGG GCGATATCAA GACGGTCATT 
ACCAGCCGCA AAGTGCTGGA GAAGAGAAAC TTCCAACTCA ATACGAAGTT CCTGCTCCTT 
GAAGACTTGA AGCCGCAGAT CTCGACTTTT GACAAGTTCT GTGCTGCCCT GGCTGCTTAC 
ACCATGCCAG CTTCGTTATT GCTGACCTGG CTGGGCCGCC CCACCCGCGG CACTGATGAA 
CTCCTGACGT TGATCTTTAC TTCAGGATCG ACTGGCCAGC CGAAAGGGGT GATGCTCACC 
CACAACAATC TGAAGATCAC TATCGACGCC GCCGACCATA TTGCCCGGCT TGAAGCCGAT 
GATACGGTTC TGGGAGTGCT GCCCTTTTTC CATAGTCTCG GGTACAGCAT TACCTTATGG 
TTGCCCCTGT GCCTTCCGCC GCGTGTGGTG TATCACGTCA ATCCGCTCGA TGCGCGCGTG 
GTCGGGCAGC TCGCTGAAAA ATATGGCGCC ACGATTCTGC TGGCCACGCC CACCTTTTTG 
CGGTCGTACC TCAAACGTTG TGAACCGGCA CAGTTCTCCA AACTCGACCT GGTGGTGGTG 
GGAGCAGAAA AGCTTCCGAA TGAACTGGCG AACGAGTTCA AGGAGAAGTT TGGCGTCTTA 
CCTTCAGAAG GTTATGGCGC GACAGAAACC ACGGGCCCGG CATTCGTCAA CGTGCCTGAT 
CATCGTTGCG AGTTGACCTC GCAAAAGGGA ACCAAGCTGG GAACCGTGGG CCGACCATTG 
CCAGGCTTTG CCGTGCGAAT TCTGGATCCG GAGAATGGTC AGGAAGTGGG TGTGAACATC 
CAGGGGCGCG TCCAGCTCAA GGGTGGCAAC GTGATGGCGG GCTACTGGAA GAATCCCGAG 
AAGACCAGCG AAGTTCTGCA GGATGGCTGG TATGACACGG GCGATCTGGG AGTGCTGGAC 
GACGAGGGTT TTCTGACGAT TACGGGCCGC CTTTCGCGAT TTTCGAAGGT CGGTGGCGAG 
ATGGTGCCGC ACCTCCGCGT GGAAGAGCTG CTGCTGGAAA TCGTCAAGAC CTCGGACGAT 
GAAGGAGCCC TGCCCCTGGC GGTGACGGCT GTTCCTGACG CACAGCGTGG AGAACGGCTG 
GTTGTGGTGC ATCGTCCTTT GGCTCAGCCG GTTGCCGAAA TACTGCGTAA ACTGGGCGAA 
ACAGGGATTC CCAACCTCTG GATTCCTGGG TCTGACAGCT TTATCGAAGT CGAAGCTGTC 
CCGATTCTGG GGACTGGCAA GCTCGATCTG AAGGGGATTA AAGACTGTGC ACTGGCTCGC 
TTCGGCCCCA AGGCATAG 

 

Protein sequence

MQTLSEANSN LRTDESTESP RPADLHDRLS SISFVSLLAV QFLTVLNDHT FRWLVVPLAK 
RLFRHTPGKV SLAEDASMLA LGLAAFTLPF LFLAAPAGYL ADRFSKAKVI TWCKLAEILI 
MLAGFAALGF SNIPLLFIVV ALTGVMNALF APARQGSIPE LVHDGSLSRA NGLMGLMNVV 
PCALGFLLGN LLATLAQPGE SDSISWQSLS TAFVVIMSIA VLGWVVSLGI RRVPAGDPEC 
RFPWNFPVDT WQSLKLLSSD VFLARTALGI AFFWLLASMA QLNIDTFAGH DLQLKQWQVG 
VFGMVLVLGV GIGSLLAGYL SGGHVELGLV PIGAMGIAIC SVVLYLAGIV NDDHRLIAFE 
LSVAGLFFLG VFAGLFDVPL EAYLQHRSEP KVLGKILAAT NFLAFSGALA AAGIFYFLLA 
VLQLSPAAVF LVCGIGTVPV AIYVMFLIPG AMFRFLFFIF THSFYRIRRY GEVNIPEKGG 
ALLVSNHVTW VDGILLMTMT PRPVRFIAYA DYVNNPWLKW LARIFEVIPI KADGGPKALI 
ESLRTARKAI EEGHVVCIFA EGGLTRTGQM QPFQPGFLKI IQGTNAPVIP VYLDGLWGSI 
FSFKGGKFFW KWPKRLLLPV NILYGQPIHE PKTVHQVRSA VQLLGVESVQ KLKSKEPSLL 
AGFIKTCRSA GSRIKVADSG GMELTGTKLL IATLAFNRLF RREIPGNEQV VGILLPPTVG 
GVLANVALSL AGKVTANLNY TLSDAQLNAC LEQGDIKTVI TSRKVLEKRN FQLNTKFLLL 
EDLKPQISTF DKFCAALAAY TMPASLLLTW LGRPTRGTDE LLTLIFTSGS TGQPKGVMLT 
HNNLKITIDA ADHIARLEAD DTVLGVLPFF HSLGYSITLW LPLCLPPRVV YHVNPLDARV 
VGQLAEKYGA TILLATPTFL RSYLKRCEPA QFSKLDLVVV GAEKLPNELA NEFKEKFGVL 
PSEGYGATET TGPAFVNVPD HRCELTSQKG TKLGTVGRPL PGFAVRILDP ENGQEVGVNI 
QGRVQLKGGN VMAGYWKNPE KTSEVLQDGW YDTGDLGVLD DEGFLTITGR LSRFSKVGGE 
MVPHLRVEEL LLEIVKTSDD EGALPLAVTA VPDAQRGERL VVVHRPLAQP VAEILRKLGE 
TGIPNLWIPG SDSFIEVEAV PILGTGKLDL KGIKDCALAR FGPKA