Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2346 |
Symbol | |
ID | 9139056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 3050118 |
End bp | 3051026 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | tyrosine recombinase XerC |
Protein accession | YP_003630371 |
Protein GI | 296122593 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.126195 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCATGCGG CTGAAGACCG ATTTCTGCGG TACCTGCAGA TCGAACGAAA TGCTTCTGAG CTGACATTGA AATCGTATGC AGAAGATTTC GGCAGTCTGC ATGACTATCT CACCGAACGG GTGGGCCACA TCACAGAACC TGGACAGTTG GGTATCTCCG AGCTGCGGGG GTATGTCGCT TACCTGAACG AGTGCGGCTA TGCCAAAACG ACCATTGCGC GAAGGTTGGC TTCGCTCAGA TCGTTCTTCC GCTTTTGCCA GCGTGAGCAG TTAGTCGAAG GAAATCCCGC CAAAGCTCTG CGTACACCTC GAGTGGGCCG CAAGCTGCCC AAGTTTTTGA CAACCGAGCA GATTGTCAAA CTCCTCGAAG CGCCGCCGGC CAATGAGGTT GATGGACTGC GAGACCGCGC TATTCTGGAA ACCTTCTATT CAGCCGGCCT TCGTGTGGCA GAACTCGTCG GGTTGAATCT CGACGACTGG GATCAGGATG CCCAGATTCT TCATGTGTTT GGTAAGGGCA AAAAGGAACG GATTGCACCT TTAGGTAAGC ACGCGACAAA AGCCCTCGAA AAGTGGGTGG CTGTCCGCAA ACCAGAAGAG GCTGCTCCCC CACAATTGAA AAATGCTCTC TTTCTCAATC GGTTTGGAAC CAGACTCACG ACCCGCAGTG TGGGCCGGAT GCTCGAAAAG TATATTCAAT TGACCGGACT CGATCAGTTG ATTTCGCCTC ATACACTCCG ACATACCTTT GCCACACATC TGCTCGACGG TGGTGCCGAC CTGAGATCGG TTCAGGAGAT GCTGGGGCAC AAAAGTCTGA CAACCACGCA GATTTACACT CACGTGAGTA CTCAACGTTT GAAGGATACC TATCAGCAGG CACATCCTCA CGCCAAAGTT CAAGACTAA
|
Protein sequence | MHAAEDRFLR YLQIERNASE LTLKSYAEDF GSLHDYLTER VGHITEPGQL GISELRGYVA YLNECGYAKT TIARRLASLR SFFRFCQREQ LVEGNPAKAL RTPRVGRKLP KFLTTEQIVK LLEAPPANEV DGLRDRAILE TFYSAGLRVA ELVGLNLDDW DQDAQILHVF GKGKKERIAP LGKHATKALE KWVAVRKPEE AAPPQLKNAL FLNRFGTRLT TRSVGRMLEK YIQLTGLDQL ISPHTLRHTF ATHLLDGGAD LRSVQEMLGH KSLTTTQIYT HVSTQRLKDT YQQAHPHAKV QD
|
| |